Gene
zgc:91944
- ID
- ZDB-GENE-040718-417
- Name
- zgc:91944
- Symbol
- zgc:91944 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Description
- Predicted to enable double-stranded telomeric DNA binding activity. Predicted to be involved in telomere maintenance via telomerase. Predicted to act upstream of or within positive regulation of DNA-templated transcription. Predicted to be located in chromosome, telomeric region; cytoplasm; and nuclear body. Predicted to be active in nucleus. Is expressed in lateral line ganglion and telencephalon.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 8 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:91944 (7 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
Protein | Additional Resources | Length | Cro/C1-type helix-turn-helix domain | Hepatocyte nuclear factor 1, N-terminal | HNF-1, dimerization domain | HNF-1, POU-specific (POUs) atypical domain | Homedomain-like superfamily | Homeobox-containing protein 1 | Homeodomain | Lambda repressor-like, DNA-binding domain superfamily |
---|---|---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M3AKA5 | InterPro | 427 | ||||||||
UniProtKB:Q6DG34 | InterPro | 469 | ||||||||
UniProtKB:F1RAA7 | InterPro | 469 |
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Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
zgc:91944-201
(1)
|
Ensembl | 3,022 nt | ||
mRNA |
zgc:91944-202
(1)
|
Ensembl | 3,127 nt | ||
mRNA |
zgc:91944-203
(1)
|
Ensembl | 798 nt | ||
mRNA |
zgc:91944-204
(1)
|
Ensembl | 2,962 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | DKEY-148N22 | ZFIN Curated Data | |
Encodes | cDNA | MGC:91944 | ZFIN Curated Data |
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Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:NM_001002668 (1) | 2980 nt | ||
Genomic | GenBank:CR318628 (1) | 115655 nt | ||
Polypeptide | UniProtKB:F1RAA7 (1) | 469 aa |
No data available
- Diotel, N., Viales, R.R., Armant, O., März, M., Ferg, M., Rastegar, S., Strähle, U. (2015) Comprehensive expression map of transcription regulators in the adult zebrafish telencephalon reveals distinct neurogenic niches. The Journal of comparative neurology. 523(8):1202-21
- Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 99(26):16899-903
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