Gene

prdm5

ID
ZDB-GENE-040708-1
Name
PR domain containing 5
Symbol
prdm5 Nomenclature History
Previous Names
  • un-named hi61 (1)
  • unm hi61 (1)
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Description
Predicted to have several functions, including DNA binding activity; histone methyltransferase binding activity; and repressing transcription factor binding activity. Involved in embryonic cranial skeleton morphogenesis; regulation of Wnt signaling pathway; and regulation of transcription, DNA-templated. Predicted to localize to nucleus. Is expressed in head; intestinal epithelium; nervous system; and pectoral fin. Orthologous to human PRDM5 (PR/SET domain 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
4 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
6 figures from 5 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With prdm5 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
brittle cornea syndrome 2 Alliance Brittle cornea syndrome 2 614170
Associated With prdm5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001214 SET domain
Domain IPR013087 Zinc finger C2H2-type
Domain IPR044415 PRDM5, PR/SET domain
Family IPR017125 PR-domain zinc finger protein PRDM5-like
Homologous_superfamily IPR036236 Zinc finger C2H2 superfamily
Domain Details Per Protein
Protein Length PRDM5, PR/SET domain PR-domain zinc finger protein PRDM5-like SET domain Zinc finger C2H2 superfamily Zinc finger C2H2-type
UniProtKB:F1Q8J8 634
UniProtKB:A9QTG6 122
UniProtKB:Q6DRP9 632
Transcripts
Genome Browsers
No data available
Interactions and Pathways
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations