Gene

tpgs2

ID

ZDB-GENE-040704-49

Name

tubulin polyglutamylase complex subunit 2

Symbol

tpgs2 Nomenclature History

Previous Names

zgc:91821

Type

protein_coding_gene

Location

Chr: 21 Mapping Details/Browsers

Description

Predicted to be involved in protein polyglutamylation. Orthologous to human TPGS2 (tubulin polyglutamylase complex subunit 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:91821 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With tpgs2 Human Ortholog

No data available

Associated With tpgs2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR018958	Knr4/Smi1-like domain
Family	IPR039231	Tubulin polyglutamylase complex subunit 2
Homologous_superfamily	IPR037883	Knr4/Smi1-like domain superfamily

Domain Details Per Protein

Protein	Length	Knr4/Smi1-like domain	Knr4/Smi1-like domain superfamily	Tubulin polyglutamylase complex subunit 2
UniProtKB:Q6GMH5 InterPro	290
UniProtKB:A0A8M3B4I9 InterPro	248

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	tpgs2-202 (1) Ensembl	Havana	770 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	tpgs2-204 (1) Ensembl	Havana	805 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	tpgs2-201 (1) Ensembl	Havana	1112 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	tpgs2-203 (1) Ensembl	Havana	945 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations