Gene

rps13

ID
ZDB-GENE-040625-52
Name
ribosomal protein S13
Symbol
rps13 Nomenclature History
Previous Names
  • fb14f11
  • fd13f08
  • fd60g01
  • wu:fb14f11
  • wu:fd13f08
  • wu:fd60g01
  • zgc:91809
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Predicted to have small ribosomal subunit rRNA binding activity. Predicted to be involved in translation. Predicted to localize to cytosolic small ribosomal subunit and nucleolus. Orthologous to human RPS13 (ribosomal protein S13).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rps13 Human Ortholog
No data available
Associated With rps13 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR012606 Small ribosomal subunit protein uS15, N-terminal
Family IPR000589 Small ribosomal subunit protein uS15
Family IPR023029 Small ribosomal subunit protein uS15, archaea/eukaryotes
Homologous_superfamily IPR009068 uS15/NS1, RNA-binding domain superfamily
Domain Details Per Protein
Protein Length Small ribosomal subunit protein uS15 Small ribosomal subunit protein uS15, archaea/eukaryotes Small ribosomal subunit protein uS15, N-terminal uS15/NS1, RNA-binding domain superfamily
UniProtKB:Q6IMW6
InterPro PDB
151
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
aberrant processed transcript rps13-202 (1)
Ensembl
Havana 525 nt
ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA rps13-201 (1)
Ensembl
Havana 564 nt
ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA rps13-003 (1)
Ensembl
Havana 721 nt
ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
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