Gene

rpsa

ID

ZDB-GENE-040426-811

Name

ribosomal protein SA

Symbol

rpsa Nomenclature History

Previous Names

laminin receptor 1 (ribosomal protein SA)
lamr1 (1)
zgc:55831
zgc:77824

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation and ribosomal small subunit assembly. Predicted to localize to cytosolic small ribosomal subunit. Is expressed in eye. Orthologous to human RPSA (ribosomal protein SA).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

3 figures from 3 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:55831 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 3 figures from 3 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rpsa Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		Asplenia, isolated congenital	271400

Associated With rpsa Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR018130	Ribosomal protein S2, conserved site
Domain	IPR032281	40S ribosomal protein SA, C-terminal domain
Family	IPR001865	Ribosomal protein S2
Family	IPR005707	Ribosomal protein S2, eukaryotic/archaeal
Family	IPR027498	Ribosomal protein S2, eukaryotic
Family	IPR027504	40S ribosomal protein SA
Homologous_superfamily	IPR023591	Ribosomal protein S2, flavodoxin-like domain superfamily

Domain Details Per Protein

Protein	Length	40S ribosomal protein SA	40S ribosomal protein SA, C-terminal domain	Ribosomal protein S2	Ribosomal protein S2, conserved site	Ribosomal protein S2, eukaryotic	Ribosomal protein S2, eukaryotic/archaeal	Ribosomal protein S2, flavodoxin-like domain superfamily
UniProtKB:J9JI05 InterPro	90
UniProtKB:B2GNT1 InterPro	308
UniProtKB:Q803F6 InterPro	308

Transcripts

Genome Browsers

Type	Name	Length (nt)	Analysis
mRNA	rpsa-201 (1) Ensembl	410 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	rpsa-202 (1) Ensembl	2351 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations