Gene

chmp2a

ID

ZDB-GENE-040426-2922

Name

charged multivesicular body protein 2A

Symbol

chmp2a Nomenclature History

Previous Names

bc2 (1)
fj10d05 (1)
wu:fi18h03
wu:fj10d05 (1)
zgc:55361 (1)

Type

protein_coding_gene

Location

Chr: 12 Mapping Details/Browsers

Description

Predicted to be involved in several processes, including endosome transport via multivesicular body sorting pathway; exit from mitosis; and late endosome to vacuole transport. Predicted to localize to ESCRT III complex; multivesicular body; and nuclear envelope. Orthologous to human CHMP2A (charged multivesicular body protein 2A).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

4 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:55361 (1 image)
IMAGE:7136173 (1 image)
IMAGE:7139900 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 3 figures from 3 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With chmp2a Human Ortholog

No data available

Associated With chmp2a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR005024	Snf7 family

Domain Details Per Protein

Protein	Length	Snf7 family
UniProtKB:Q7ZW25 InterPro	220

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	chmp2a-201 (1) Ensembl	Havana	1682 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	bc2-003 (1) Ensembl	Havana	530 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	bc2-004 (1) Ensembl	Havana	757 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	bc2-005 (1) Ensembl	Havana	757 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations