Gene

rmnd5b

ID

ZDB-GENE-040426-1744

Name

required for meiotic nuclear division 5 homolog B

Symbol

rmnd5b Nomenclature History

Previous Names

zgc:73277

Type

protein_coding_gene

Location

Chr: 14 Mapping Details/Browsers

Description

Predicted to contribute to ubiquitin-protein transferase activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to localize to GID complex; cytoplasm; and nucleus. Orthologous to human RMND5B (required for meiotic nuclear division 5 homolog B).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:73277 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rmnd5b Human Ortholog

No data available

Associated With rmnd5b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR006594	LIS1 homology motif
Domain	IPR006595	CTLH, C-terminal LisH motif
Domain	IPR013144	CRA domain
Domain	IPR024964	CTLH/CRA C-terminal to LisH motif domain
Domain	IPR027370	Zinc finger, RING-type, eukaryotic
Domain	IPR037681	Protein RMD5 homologue B, degenerated RING finger
Domain	IPR044063	Gid-type RING finger domain
Family	IPR045098	Fyv10 family

Domain Details Per Protein

Protein	Length	CRA domain	CTLH/CRA C-terminal to LisH motif domain	CTLH, C-terminal LisH motif	Fyv10 family	Gid-type RING finger domain	LIS1 homology motif	Protein RMD5 homologue B, degenerated RING finger	Zinc finger, RING-type, eukaryotic
UniProtKB:Q6PBS0 InterPro	391

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	rmnd5b-201 (1) Ensembl	Havana	1494 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	rmnd5b-202 (1) Ensembl	Havana	2761 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	rmnd5b-203 (1) Ensembl	Havana	304 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	rmnd5b-204 (1) Ensembl	Havana	655 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations