ZFIN is now using GRCz12tu for Genomic Data
Gene
chst14
- ID
- ZDB-GENE-040401-3
- Name
- carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
- Symbol
- chst14 Nomenclature History
- Previous Names
-
- d4st1
- wu:fc04a01
- zgc:136487
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable dermatan 4-sulfotransferase activity. Predicted to be involved in dermatan sulfate proteoglycan metabolic process. Predicted to act upstream of or within carbohydrate biosynthetic process. Predicted to be located in Golgi membrane. Is expressed in head; midbrain hindbrain boundary; notochord; pectoral fin; and spinal cord. Human ortholog(s) of this gene implicated in Ehlers-Danlos syndrome musculocontractural type 1. Orthologous to human CHST14 (carbohydrate sulfotransferase 14).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Ehlers-Danlos syndrome musculocontractural type 1 | Alliance | Ehlers-Danlos syndrome, musculocontractural type 1 | 601776 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Carbohydrate sulfotransferase 8-10 | Sulfotransferase |
|---|---|---|---|---|
| UniProtKB:Q1RM39 | InterPro | 367 | ||
| UniProtKB:Q805E5 | InterPro | 367 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
chst14-201
(1)
|
Ensembl | 1,707 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers