ZFIN is now using GRCz12tu for Genomic Data
Gene
rtn4rl2a
- ID
- ZDB-GENE-040310-4
- Name
- reticulon 4 receptor-like 2 a
- Symbol
- rtn4rl2a Nomenclature History
- Previous Names
-
- NgRH1a
- Type
- protein_coding_gene
- Location
- Chr: 1 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable signaling receptor activity. Acts upstream of or within posterior lateral line neuromast deposition. Predicted to be located in membrane raft and perikaryon. Predicted to be active in plasma membrane. Orthologous to human RTN4RL2 (reticulon 4 receptor like 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Han et al., 2014
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000483 | Cysteine-rich flanking region, C-terminal |
| Family | IPR050541 | Leucine-rich repeat and transmembrane domain-containing protein |
| Homologous_superfamily | IPR032675 | Leucine-rich repeat domain superfamily |
| Repeat | IPR001611 | Leucine-rich repeat |
| Repeat | IPR003591 | Leucine-rich repeat, typical subtype |
Domain Details Per Protein
| Protein | Additional Resources | Length | Cysteine-rich flanking region, C-terminal | Leucine-rich repeat | Leucine-rich repeat and transmembrane domain-containing protein | Leucine-rich repeat domain superfamily | Leucine-rich repeat, typical subtype |
|---|---|---|---|---|---|---|---|
| UniProtKB:Q6WZD3 | InterPro | 458 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
rtn4rl2a-201
(1)
|
Ensembl | 1,565 nt | ||
| mRNA |
rtn4rl2a-202
(1)
|
Ensembl | 3,819 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers