ZFIN is now using GRCz12tu for Genomic Data
Gene
eif4a1a
- ID
- ZDB-GENE-031030-2
- Name
- eukaryotic translation initiation factor 4A1A
- Symbol
- eif4a1a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable translation initiation factor activity. Predicted to be involved in cytoplasmic translational initiation. Predicted to act upstream of or within translational initiation. Is expressed in several structures, including immature eye; neural rod; neuromast; paraxial mesoderm; and somite. Orthologous to human EIF4A1 (eukaryotic translation initiation factor 4A1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 14 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001650 | Helicase, C-terminal domain-like |
| Domain | IPR011545 | DEAD/DEAH box helicase domain |
| Domain | IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Domain | IPR014014 | RNA helicase, DEAD-box type, Q motif |
| Domain | IPR044728 | ATP-dependent RNA helicase eIF4A, DEAD-box helicase domain |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Domain Details Per Protein
| Protein | Additional Resources | Length | ATP-dependent RNA helicase eIF4A, DEAD-box helicase domain | DEAD/DEAH box helicase domain | Helicase, C-terminal domain-like | Helicase superfamily 1/2, ATP-binding domain | P-loop containing nucleoside triphosphate hydrolase | RNA helicase, DEAD-box type, Q motif |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q802C9 | InterPro | 406 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
eif4a1a-201
(1)
|
Ensembl | 2,370 nt | ||
| ncRNA |
eif4a1a-002
(1)
|
Ensembl | 1,004 nt | ||
| ncRNA |
eif4a1a-003
(1)
|
Ensembl | 677 nt | ||
| ncRNA |
eif4a1a-004
(1)
|
Ensembl | 382 nt | ||
| ncRNA |
eif4a1a-005
(1)
|
Ensembl | 883 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers