ZFIN is now using GRCz12tu for Genomic Data
Gene
nt5c2l1
- ID
- ZDB-GENE-031006-8
- Name
- 5'-nucleotidase, cytosolic II, like 1
- Symbol
- nt5c2l1 Nomenclature History
- Previous Names
-
- nt5c2
- cb904 (1)
- id:ibd5113
- zgc:92102
- Type
- protein_coding_gene
- Location
- Chr: 10 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable 5'-nucleotidase activity. Acts upstream of or within cellular response to xenobiotic stimulus. Is expressed in blood; eye; tail bud; ventral mesoderm; and yolk syncytial layer. Orthologous to human NT5DC4 (5'-nucleotidase domain containing 4).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 9 figures from 4 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb904 (5 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | HAD-like superfamily | HAD superfamily | HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase | Purine 5'-nucleotidase |
|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9PTI8 | InterPro | 546 | ||||
| UniProtKB:A0A8M9QGL3 | InterPro | 547 | ||||
| UniProtKB:Q66I11 | InterPro | 518 | ||||
| UniProtKB:A0AB32U291 | InterPro | 517 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
nt5c2l1-201
(1)
|
Ensembl | 2,250 nt | ||
| mRNA |
nt5c2l1-202
(1)
|
Ensembl | 2,218 nt | ||
| mRNA |
nt5c2l1-204
(1)
|
Ensembl | 717 nt | ||
| ncRNA |
nt5c2l1-003
(1)
|
Ensembl | 841 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers