Gene

nid2a

ID
ZDB-GENE-030827-2
Name
nidogen 2a (osteonidogen)
Symbol
nid2a Nomenclature History
Previous Names
  • nid2
  • chunp382
  • fb77a09
  • fc18d04
  • im:7144424
  • wu:fb77a09
  • wu:fc18d04
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Description
Predicted to enable calcium ion binding activity. Acts upstream of or within closure of optic fissure and fin regeneration. Predicted to be located in extracellular region. Predicted to be active in basement membrane and extracellular space. Is expressed in several structures, including axis; digestive system; head mesenchyme; nervous system; and pectoral fin bud. Orthologous to human NID2 (nidogen 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
18 figures from 7 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With nid2a Human Ortholog
No data available
Associated With nid2a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR018097 EGF-like calcium-binding, conserved site
Domain IPR000716 Thyroglobulin type-1
Domain IPR000742 EGF-like domain
Domain IPR001881 EGF-like calcium-binding domain
Domain IPR003886 NIDO domain
1 - 5 of 15 Show all
Domain Details Per Protein
Protein Additional Resources Length Developmental regulator and protease inhibitor EGF domain EGF-like calcium-binding, conserved site EGF-like calcium-binding domain EGF-like domain EGF-type aspartate/asparagine hydroxylation site G2 nidogen/fibulin G2F Green fluorescent protein Growth factor receptor cysteine-rich domain superfamily LDLR class B repeat NIDO domain NOTCH1 EGF-like calcium-binding domain Six-bladed beta-propeller, TolB-like Thyroglobulin type-1 Thyroglobulin type-1 superfamily
UniProtKB:A0A8M2BH70 InterPro 1804
UniProtKB:A0A8M2BH21 InterPro 1576
UniProtKB:A0A8M2BH48 InterPro 1424
UniProtKB:A0A8M2BH51 InterPro 1728
UniProtKB:A0A8M9PEL7 InterPro 1728
1 - 5 of 7 Show all
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA nid2a-201 (1)
Ensembl
Ensembl 773 nt
ZFIN BLAST
mRNA nid2a-202 (1)
Ensembl
Ensembl 5,230 nt
ZFIN BLAST
mRNA nid2a-203 (1)
Ensembl
Ensembl 814 nt
ZFIN BLAST
mRNA nid2a-204 (1)
Ensembl
Ensembl 649 nt
ZFIN BLAST
mRNA nid2a-205 (1)
Ensembl
Ensembl 423 nt
ZFIN BLAST
1 - 5 of 7 Show all
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Citations
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