ZFIN is now using GRCz12tu for Genomic Data
Gene
slc6a22.2
- ID
- ZDB-GENE-030616-628
- Name
- solute carrier family 6 member 22, tandem duplicate 2
- Symbol
- slc6a22.2 Nomenclature History
- Previous Names
-
- slc6a13l
- si:ch211-263a23.6
- si:zc263a23.6
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable gamma-aminobutyric acid:sodium:chloride symporter activity. Predicted to be involved in amino acid transport and sodium ion transmembrane transport. Predicted to be located in membrane. Predicted to be active in cell projection and plasma membrane. Orthologous to human SLC6A12 (solute carrier family 6 member 12).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Sodium:neurotransmitter symporter | Sodium:neurotransmitter symporter superfamily |
|---|---|---|---|---|
| UniProtKB:A0A2R8QKW4 | InterPro | 575 | ||
| UniProtKB:A0A8M2BDC6 | InterPro | 551 | ||
| UniProtKB:F1Q5E6 | InterPro | 608 | ||
| UniProtKB:A0AB32TWV6 | InterPro | 619 | ||
| UniProtKB:A0AB32TY27 | InterPro | 598 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
slc6a22.2-201
(1)
|
Ensembl | 2,332 nt | ||
| mRNA |
slc6a22.2-202
(1)
|
Ensembl | 1,935 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers