Gene

prpf39

ID
ZDB-GENE-030616-420
Name
PRP39 pre-mRNA processing factor 39 homolog (yeast)
Symbol
prpf39 Nomenclature History
Previous Names
  • fa10d07
  • si:dz261o22.3
  • wu:fa10d07
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to contribute to pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to localize to U1 snRNP; U2-type prespliceosome; and commitment complex. Orthologous to human PRPF39 (pre-mRNA processing factor 39).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2005
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With prpf39 Human Ortholog
No data available
Associated With prpf39 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Homologous_superfamily IPR011990 Tetratricopeptide-like helical domain superfamily
Repeat IPR003107 HAT (Half-A-TPR) repeat
Domain Details Per Protein
Protein Length HAT (Half-A-TPR) repeat Tetratricopeptide-like helical domain superfamily
UniProtKB:A0A8M3B4E2 381
UniProtKB:Q1JPZ7 752
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations