Gene

sf3a1

ID
ZDB-GENE-030616-156
Name
splicing factor 3a, subunit 1
Symbol
sf3a1 Nomenclature History
Previous Names
  • si:dz150f13.2
  • wu:fc38e01
  • wu:fc50a11
  • wu:fj37c05
Type
protein_coding_gene
Location
Chr: 8 Mapping Details/Browsers
Description
Predicted to have RNA binding activity. Predicted to be involved in RNA processing. Predicted to localize to U2 snRNP; U2-type prespliceosome; and catalytic step 2 spliceosome. Orthologous to human SF3A1 (splicing factor 3a subunit 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sf3a1 Human Ortholog
No data available
Associated With sf3a1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000061 SWAP/Surp
Domain IPR000626 Ubiquitin-like domain
Domain IPR022030 Splicing factor 3A subunit 1, conserved domain
Domain IPR035563 Splicing factor 3A subunit 1, ubiquitin domain
Family IPR045146 Splicing factor 3A subunit 1
Homologous_superfamily IPR029071 Ubiquitin-like domain superfamily
Homologous_superfamily IPR035967 SWAP/Surp superfamily
Domain Details Per Protein
Protein Length Splicing factor 3A subunit 1 Splicing factor 3A subunit 1, conserved domain Splicing factor 3A subunit 1, ubiquitin domain SWAP/Surp SWAP/Surp superfamily Ubiquitin-like domain Ubiquitin-like domain superfamily
UniProtKB:Q90X41 780
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations