ZFIN is now using GRCz12tu for Genomic Data
Gene
parapinopsinb
- ID
- ZDB-GENE-030616-134
- Name
- parapinopsin b
- Symbol
- parapinopsinb Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable G protein-coupled photoreceptor activity. Acts upstream of or within absorption of visible light. Predicted to be located in membrane. Predicted to be active in photoreceptor outer segment and plasma membrane. Is expressed in several structures, including endocrine system; fin; gill; heart; and integument.
- Genome Resources
- Note
-
novel opsin
- Comparative Information
-
- All Expression Data
- 4 figures from 4 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | GPCR, rhodopsin-like, 7TM | G-protein coupled receptor opsins | G protein-coupled receptor, rhodopsin-like | Opsin | Visual pigments (opsins) retinal binding site |
|---|---|---|---|---|---|---|---|
| UniProtKB:Q8JFR3 | InterPro | 322 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA | parapinopsinb-001 (1) | Havana | 969 nt | ||
| mRNA |
parapinopsinb-201
(1)
|
Ensembl | 969 nt | ||
| mRNA |
parapinopsinb-202
(1)
|
Ensembl | 2,056 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers