ftr82

ID

ZDB-GENE-030219-207

Name

finTRIM family, member 82

Symbol

ftr82 Nomenclature History

Previous Names

cb579 (1)
id:ibd1340
sb:cb579
si:dkey-252h13.6 (1)
wu:fb99c05
zgc:153276

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to enable zinc ion binding activity. Acts upstream of or within vasculature development. Predicted to be located in cytoplasm. Is expressed in several structures, including cardiovascular system; digestive system; head mesenchyme; mesoderm; and pleuroperitoneal region. Orthologous to human TRIM29 (tripartite motif containing 29).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

16 figures from 6 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cb579 (35 images)
IMAGE:7166053 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 6 figures from Chang et al., 2017
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ftr82 Human Ortholog

No data available

Associated With ftr82 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR017907	Zinc finger, RING-type, conserved site
Domain	IPR000315	B-box-type zinc finger
Domain	IPR001841	Zinc finger, RING-type
Domain	IPR001870	B30.2/SPRY domain
Domain	IPR003877	SPRY domain
Domain	IPR003879	Butyrophylin-like, SPRY domain
Domain	IPR006574	SPRY-associated
Family	IPR051051	E3 ubiquitin-protein ligase TRIM/RNF
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily	IPR043136	B30.2/SPRY domain superfamily