ZFIN is now using GRCz12tu for Genomic Data
Gene
atp6v1ab
- ID
- ZDB-GENE-030131-9529
- Name
- ATPase H+ transporting V1 subunit Ab
- Symbol
- atp6v1ab Nomenclature History
- Previous Names
-
- atp6v1a
- im:7154831
- wu:fj85a05
- Type
- protein_coding_gene
- Location
- Chr: 24 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be located in apical plasma membrane. Predicted to be part of proton-transporting V-type ATPase, V1 domain. Is expressed in several structures, including integument ionocyte; lateral line ganglion; neural crest; yolk; and yolk syncytial layer. Human ortholog(s) of this gene implicated in autosomal recessive cutis laxa type IID and developmental and epileptic encephalopathy 93. Orthologous to human ATP6V1A (ATPase H+ transporting V1 subunit A).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 15 figures from 5 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7154831 (14 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
---|---|---|---|
autosomal recessive cutis laxa type IID | Alliance | Cutis laxa, autosomal recessive, type IID | 617403 |
developmental and epileptic encephalopathy 93 | Alliance | Developmental and epileptic encephalopathy 93 | 618012 |
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Active_site | IPR020003 | ATPase, alpha/beta subunit, nucleotide-binding domain, active site |
Domain | IPR000194 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain |
Domain | IPR004100 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain |
Domain | IPR031686 | ATPsynthase alpha/beta subunit, barrel-sandwich domain |
Domain | IPR055190 | ATP synthase A/B type, C-terminal domain |
Family | IPR005725 | ATPase, V1 complex, subunit A |
Family | IPR022878 | V-type ATP synthase catalytic alpha chain |
Homologous_superfamily | IPR023366 | ATP synthase subunit alpha, N-terminal domain-like superfamily |
Homologous_superfamily | IPR024034 | ATPase, F1/V1 complex, beta/alpha subunit, C-terminal |
Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Homologous_superfamily | IPR036121 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily |
Domain Details Per Protein
Protein | Additional Resources | Length | ATPase, alpha/beta subunit, nucleotide-binding domain, active site | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | ATPase, F1/V1 complex, beta/alpha subunit, C-terminal | ATPase, V1 complex, subunit A | ATP synthase A/B type, C-terminal domain | ATPsynthase alpha/beta subunit, barrel-sandwich domain | ATP synthase subunit alpha, N-terminal domain-like superfamily | P-loop containing nucleoside triphosphate hydrolase | V-type ATP synthase catalytic alpha chain |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
UniProtKB:E7FCD8 | InterPro | 617 |
Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
atp6v1ab-201
(1)
|
Ensembl | 2,555 nt |
Interactions and Pathways
No data available
Plasmids
No data available