ZFIN is now using GRCz12tu for Genomic Data
Gene
cdc42se1
- ID
- ZDB-GENE-030131-9260
- Name
- CDC42 small effector 1
- Symbol
- cdc42se1 Nomenclature History
- Previous Names
-
- spec1 (1)
- wu:fa55c04
- wu:fc05d06
- zgc:55642
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable small GTPase binding activity. Acts upstream of or within midbrain-hindbrain boundary morphogenesis. Predicted to be located in cytoplasm; cytoskeleton; and membrane. Predicted to be active in plasma membrane. Is expressed in primordial germ cell. Orthologous to human CDC42SE1 (CDC42 small effector 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:55642 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Dworkin et al., 2012
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | CDC42 small effector protein | CRIB domain | CRIB domain superfamily |
|---|---|---|---|---|---|
| UniProtKB:Q6TEL3 | InterPro | 75 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
cdc42se1-201
(1)
|
Ensembl | 2,158 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers