ZFIN is now using GRCz12tu for Genomic Data
Gene

ssr3

ID
ZDB-GENE-030131-9134
Name
signal sequence receptor, gamma
Symbol
ssr3 Nomenclature History
Previous Names
  • fb01d07
  • wu:fb01d07
  • zgc:56300 (1)
Type
protein_coding_gene
Location
Chr: 18 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in endoplasmic reticulum. Is expressed in several structures, including axis; hatching gland; otic placode; pectoral fin skeleton; and polster. Orthologous to human SSR3 (signal sequence receptor subunit 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
No data available
Human Disease
Associated With ssr3 Human Ortholog
No data available
Associated With ssr3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR009779 Translocon-associated protein subunit gamma
1 - 1 of 1
Domain Details Per Protein
Protein Additional Resources Length Translocon-associated protein subunit gamma
UniProtKB:Q7ZUR5 InterPro 185
1 - 1 of 1
Transcripts
Genome Browsers
Genome Assembly: GRCz11Chromosome: 18
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ssr3-201 (1) Ensembl 850 nt
mRNA ssr3-202 (1) Ensembl 903 nt
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-33K14ZFIN Curated Data
Contained inBACDKEY-273D4ZFIN Curated Data
EncodesESTfb01d07
EncodesESTIMAGE:7138699Thisse et al., 2004
EncodescDNAMGC:56300ZFIN Curated Data
1 - 5 of 5
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Sequences
Genome Browsers
Genome Assembly: GRCz12tuChromosome: 18
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanSSR33
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
1 - 2 of 2
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