Gene
linc.pou2af1
- ID
- ZDB-GENE-030131-8357
- Name
- lnc RNA pou2af1
- Symbol
- linc.pou2af1 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Description
- Orthologous to human POU2AF3 (POU class 2 homeobox associating factor 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | OCA domain | POU class 2 homeobox associating factor 3 |
|---|---|---|---|---|
| UniProtKB:A0A8N7TEI7 | InterPro | 191 | ||
| UniProtKB:A0A8M6YSH4 | InterPro | 234 | ||
| UniProtKB:A0A8M9PC09 | InterPro | 235 | ||
| UniProtKB:A0A8M9PNK4 | InterPro | 191 | ||
| UniProtKB:A0AB13A3S6 | InterPro | 191 |
1 - 5 of 7 Show all
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:ch211-213d14.2-203
(1)
|
Ensembl | 809 nt | ||
| mRNA |
si:ch211-213d14.2-204
(1)
|
Ensembl | 1,111 nt | ||
| ncRNA |
si:ch211-213d14.2-002
(1)
|
Ensembl | 725 nt | ||
| ncRNA |
si:ch211-213d14.2-003
(1)
|
Ensembl | 823 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-213D14 | ZFIN Curated Data | |
| Encodes | EST | fb09h07 |
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Show
| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001386216 (1) | 2663 nt | ||
| Genomic | GenBank:CT573342 (2) | 132505 nt | ||
| Polypeptide | UniProtKB:A0A8M9PC09 (1) | 235 aa |
No data available