Gene

atrnl1b

ID

ZDB-GENE-030131-8092

Name

attractin-like 1b

Symbol

atrnl1b Nomenclature History

Previous Names

atrnl1
fj51h04
wu:fj51h04

Type

protein_coding_gene

Location

Chr: 12 Mapping Details/Browsers

Description

Predicted to be involved in animal organ morphogenesis and tissue development. Predicted to localize to integral component of membrane. Orthologous to human ATRNL1 (attractin like 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

IMAGE:7136412 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With atrnl1b Human Ortholog

No data available

Associated With atrnl1b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000742	EGF-like domain
Domain	IPR000859	CUB domain
Domain	IPR001304	C-type lectin-like
Domain	IPR002049	Laminin-type EGF domain
Domain	IPR016201	PSI domain
Domain	IPR034011	Attractin-like, C-type lectin-like domain
Homologous_superfamily	IPR015915	Kelch-type beta propeller
Homologous_superfamily	IPR016186	C-type lectin-like/link domain superfamily
Homologous_superfamily	IPR016187	C-type lectin fold
Homologous_superfamily	IPR035914	Spermadhesin, CUB domain superfamily
Repeat	IPR002165	Plexin repeat

Domain Details Per Protein

Protein	Length	Attractin-like, C-type lectin-like domain	C-type lectin fold	C-type lectin-like	C-type lectin-like/link domain superfamily	CUB domain	EGF-like domain	Kelch-type beta propeller	Laminin-type EGF domain	Plexin repeat	PSI domain	Spermadhesin, CUB domain superfamily
UniProtKB:E7F6C7 InterPro	1364

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	atrnl1b-201 (1) Ensembl	Havana	7028 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations