ZFIN is now using GRCz12tu for Genomic Data
Gene
tspan6
- ID
- ZDB-GENE-030131-5435
- Name
- tetraspanin 6
- Symbol
- tspan6 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of with a positive effect on organelle assembly. Predicted to be located in membrane. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in non-syndromic X-linked intellectual disability 58. Orthologous to several human genes including TSPAN6 (tetraspanin 6).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
Wild Type Expression Summary
- All Phenotype Data
- 6 figures from Jiang et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Tetraspanin-6/7, EC2 domain | Tetraspanin, animals | Tetraspanin, conserved site | Tetraspanin, EC2 domain superfamily | Tetraspanin/Peripherin |
|---|---|---|---|---|---|---|---|
| UniProtKB:Q7SXT2 | InterPro | 251 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
tspan7-201
(1)
|
Ensembl | 2,013 nt | ||
| mRNA |
tspan7-202
(1)
|
Ensembl | 772 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers