Gene
capns1b
- ID
- ZDB-GENE-030131-5206
- Name
- calpain, small subunit 1 b
- Symbol
- capns1b Nomenclature History
- Previous Names
-
- cb536 (1)
- fa18a08
- wu:fa18a08
- zgc:171735
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Description
- Predicted to enable calcium ion binding activity. Predicted to be located in cytoplasm and plasma membrane. Predicted to be part of calpain complex. Is expressed in several structures, including digestive system; epidermis; nervous system; pectoral fin; and periderm. Orthologous to several human genes including CAPNS1 (calpain small subunit 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 9 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb536 (18 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Pulmonary hypertension, primary, 6 | 620777 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | EF-Hand 1, calcium-binding site | EF-hand domain | EF-hand domain pair |
|---|---|---|---|---|---|
| UniProtKB:A7MBX1 | InterPro | 213 | |||
| UniProtKB:B3DFQ1 | InterPro | 213 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
capns1b-201
(1)
|
Ensembl | 1,345 nt | ||
| mRNA |
capns1b-202
(1)
|
Ensembl | 971 nt | ||
| mRNA |
capns1b-204
(1)
|
Ensembl | 692 nt | ||
| mRNA |
capns1b-205
(1)
|
Ensembl | 1,257 nt | ||
| mRNA |
capns1b-206
(1)
|
Ensembl | 1,344 nt | ||
| ncRNA |
capns1b-004
(1)
|
Ensembl | 849 nt |
Interactions and Pathways
No data available
Plasmids
No data available