ZFIN is now using GRCz12tu for Genomic Data
Gene

si:dkey-156n14.3

ID
ZDB-GENE-030131-4816
Name
si:dkey-156n14.3
Symbol
si:dkey-156n14.3 Nomenclature History
Previous Names
  • fd99c07
  • wu:fb99g10
  • wu:fd99c07 (1)
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to several human genes including ZXDC (ZXD family zinc finger C).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa26744Allele with one point mutationUnknownPremature StopENU
sa40690Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
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Sequence Targeting Reagents
No data available
Human Disease
Associated With si:dkey-156n14.3 Human Ortholog
No data available
Associated With si:dkey-156n14.3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR013087 Zinc finger C2H2-type
Family IPR051061 Zinc finger transcriptional regulators
Homologous_superfamily IPR036236 Zinc finger C2H2 superfamily
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Domain Details Per Protein
Protein Additional Resources Length Zinc finger C2H2 superfamily Zinc finger C2H2-type Zinc finger transcriptional regulators
UniProtKB:I3IT94 InterPro 1231
UniProtKB:A0A8M1RK62 InterPro 1231
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Transcripts
Genome Browsers
Genome Assembly: GRCz11Chromosome: 6
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA si:dkey-156n14.3-201 (1)
Ensembl
Ensembl 4,243 nt
ZFIN BLAST
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-156N14ZFIN Curated Data
Contained inBACDKEY-188N1ZFIN Curated Data
Contained inFosmidZFOS-2506A4ZFIN Curated Data
ContainsSNPrs3727962
    		ZFIN Curated Data
    ContainsSNPrs3727963
      		ZFIN Curated Data
      ContainsSNPrs3727964
        		ZFIN Curated Data
        ContainsSNPrs3727965
          		ZFIN Curated Data
          EncodesESTfb99g10
          EncodesESTfd99c07
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          Sequences
          Genome Browsers
          Genome Assembly: GRCz12tuChromosome: 6
          Type Accession # Genome Assembly Length (nt/aa) Analysis
          RNARefSeq:XM_021477089 (1)GRCz12tu4277 nt
          ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
          GenomicGenBank:CR626864 (2)173100 nt
          MegaBLASTEnsembl
          PolypeptideUniProtKB:A0A8M1RK62 (1)1231 aa
          ZFIN BLASTSIB BLASTEnsembl Protein Blast
          Orthology
          Comparative Orthology
          Alliance
          No data available
          Citations
          TSV
          1 - 1 of 1
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          Your Input Welcome
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