Gene

tsr1

ID
ZDB-GENE-030131-3762
Name
TSR1 ribosome maturation factor
Symbol
tsr1 Nomenclature History
Previous Names
  • fc52b09
  • wu:fc52b09
  • zgc:123319 (1)
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Predicted to have GTP binding activity; GTPase activity; and U3 snoRNA binding activity. Predicted to be involved in endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to localize to preribosome, small subunit precursor. Orthologous to human TSR1 (TSR1 ribosome maturation factor).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With tsr1 Human Ortholog
No data available
Associated With tsr1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR007034 Ribosome biogenesis protein BMS1/TSR1, C-terminal
Domain IPR012948 AARP2CN
Domain IPR030387 Bms1/Tsr1-type G domain
Family IPR039761 Ribosome biogenesis protein Bms1/Tsr1
Domain Details Per Protein
Protein Length AARP2CN Bms1/Tsr1-type G domain Ribosome biogenesis protein Bms1/Tsr1 Ribosome biogenesis protein BMS1/TSR1, C-terminal
UniProtKB:E7FCX4
InterPro
836
UniProtKB:A0A0R4IKX4
InterPro
822
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
aberrant processed transcript tsr1-203 (1)
Ensembl
Havana 1547 nt
ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA tsr1-201 (1)
Ensembl
Havana 2653 nt
ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA tsr1-202 (1)
Ensembl
Havana 1801 nt
ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
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