Gene

pan2

ID
ZDB-GENE-030131-3113
Name
poly(A) specific ribonuclease subunit PAN2
Symbol
pan2 Nomenclature History
Previous Names
  • fc27e10
  • si:dkey-126g1.10
  • wu:fc27e10 (1)
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Description
Predicted to contribute to poly(A)-specific ribonuclease activity. Predicted to be involved in nuclear-transcribed mRNA poly(A) tail shortening. Predicted to localize to P-body and PAN complex. Orthologous to human PAN2 (poly(A) specific ribonuclease subunit PAN2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pan2 Human Ortholog
No data available
Associated With pan2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR013520 Exonuclease, RNase T/DNA polymerase III
Domain IPR028881 PAN2, UCH domain
Domain IPR028889 Ubiquitin specific protease domain
Domain IPR048841 PAN2-PAN3 deadenylation complex catalytic subunit PAN2, N-terminal
Family IPR030843 PAN2-PAN3 deadenylation complex catalytic subunit PAN2
Homologous_superfamily IPR012337 Ribonuclease H-like superfamily
Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily IPR036322 WD40-repeat-containing domain superfamily
Homologous_superfamily IPR036397 Ribonuclease H superfamily
Homologous_superfamily IPR038765 Papain-like cysteine peptidase superfamily
Domain Details Per Protein
Protein Length Exonuclease, RNase T/DNA polymerase III PAN2-PAN3 deadenylation complex catalytic subunit PAN2 PAN2-PAN3 deadenylation complex catalytic subunit PAN2, N-terminal PAN2, UCH domain Papain-like cysteine peptidase superfamily Ribonuclease H-like superfamily Ribonuclease H superfamily Ubiquitin specific protease domain WD40-repeat-containing domain superfamily WD40/YVTN repeat-like-containing domain superfamily
UniProtKB:A0A8M2B989 1206
UniProtKB:E9QJN4 1202
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA pan2-201 (1) Havana 4146 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations