ZFIN is now using GRCz12tu for Genomic Data
Gene

olfcb1

ID
ZDB-GENE-030131-2664
Name
olfactory receptor C family, b1
Symbol
olfcb1 Nomenclature History
Previous Names
  • fc14h06
  • si:ch1073-155h21.1 (1)
  • wu:fc14h06 (1)
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to enable G protein-coupled receptor activity. Predicted to be involved in sensory perception of taste. Predicted to be active in plasma membrane.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa1960Allele with one point mutationUnknownPremature StopENU
sa15865Allele with one point mutationUnknownPremature StopENU
European Zebrafish Resource Center (EZRC) (order this)
Zebrafish International Resource Center (ZIRC) (order this)
sa36925Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
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Sequence Targeting Reagents
No data available
Human Disease
Associated With olfcb1 Human Ortholog
No data available
Associated With olfcb1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017979 GPCR, family 3, conserved site
Domain IPR001828 Receptor, ligand binding region
Domain IPR011500 GPCR, family 3, nine cysteines domain
Domain IPR017978 GPCR family 3, C-terminal
Family IPR000068 GPCR, family 3, extracellular calcium-sensing receptor-related
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Domain Details Per Protein
Protein Additional Resources Length GPCR, family 3 GPCR, family 3, conserved site GPCR family 3, C-terminal GPCR, family 3, extracellular calcium-sensing receptor-related GPCR, family 3, nine cysteines domain GPCR, family 3, nine cysteines domain superfamily Periplasmic binding protein-like I Receptor, ligand binding region
UniProtKB:F1QPB6 InterPro 890
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Transcripts
Genome Browsers
Genome Assembly: GRCz11Chromosome: 20
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA si:ch1073-155h21.1-201 (1)
Ensembl
Ensembl 3,479 nt
ZFIN BLAST
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH73-57F22ZFIN Curated Data
Contained inFosmidCH1073-155H21ZFIN Curated Data
EncodesESTfc14h06
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Sequences
Genome Browsers
Genome Assembly: GRCz12tuChromosome: 20
Type Accession # Genome Assembly Length (nt/aa) Analysis
RNARefSeq:NM_001199968 (1)2768 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:FP017161 (2)92426 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:F1QPB6 (1)890 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
No data available
Citations
TSV
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