Gene

pphln1

ID
ZDB-GENE-030131-1873
Name
periphilin 1
Symbol
pphln1 Nomenclature History
Previous Names
  • si:ch211-155a11.2
  • wu:fb83c09
  • zgc:158246
Type
protein_coding_gene
Location
Chr: 4 Mapping Details/Browsers
Description
Predicted to be involved in negative regulation of gene expression, epigenetic and protein localization to heterochromatin. Predicted to be active in nucleoplasm. Orthologous to human PPHLN1 (periphilin 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
la024420TgTransgenic insertionUnknownUnknownDNA
la028971TgTransgenic insertionUnknownUnknownDNA
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Sequence Targeting Reagents
No data available
Human Disease
Associated With pphln1 Human Ortholog
No data available
Associated With pphln1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR028851 Periphilin-1
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Domain Details Per Protein
Protein Additional Resources Length Periphilin-1
UniProtKB:A0A8M9Q633 InterPro 393
UniProtKB:A1A5V1 InterPro 362
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 4
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pphln1-201 (1) Ensembl 1,988 nt
mRNA pphln1-202 (1) Ensembl 807 nt
mRNA pphln1-203 (1) Ensembl 670 nt
mRNA pphln1-204 (1) Ensembl 596 nt
mRNA pphln1-205 (1) Ensembl 764 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-155A11ZFIN Curated Data
EncodesESTfb83c09
EncodescDNAMGC:158246ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanPPHLN112
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MousePphln115
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
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