ZFIN is now using GRCz12tu for Genomic Data
Gene
sdc2
- ID
- ZDB-GENE-021206-3
- Name
- syndecan 2
- Symbol
- sdc2 Nomenclature History
- Previous Names
-
- cb440 (1)
- zgc:103676
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of or within several processes, including Kupffer's vesicle development; circulatory system development; and epiboly involved in gastrulation with mouth forming second. Predicted to be located in membrane. Predicted to be active in cell surface. Is expressed in several structures, including cardiovascular system; digestive system; endoderm; fin; and nervous system. Human ortholog(s) of this gene implicated in cleft lip and cleft palate. Orthologous to human SDC2 (syndecan 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 14 figures from 7 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb440 (17 images)
Wild Type Expression Summary
- All Phenotype Data
- 10 figures from 3 publications
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Neurexin/syndecan/glycophorin C | Syndecan | Syndecan, conserved site | Syndecan/Neurexin domain |
|---|---|---|---|---|---|---|
| UniProtKB:Q66I66 | InterPro | 208 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers