Gene

sall1b

ID
ZDB-GENE-020228-3
Name
spalt-like transcription factor 1b
Symbol
sall1b Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 25 Mapping Details/Browsers
Description
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in Townes-Brocks syndrome; middle lobe syndrome; and renal Wilms' tumor. Orthologous to human SALL1 (spalt like transcription factor 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Camp et al., 2003
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sall1b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Townes-Brocks syndrome Alliance Townes-Brocks branchiootorenal-like syndrome 107480
Townes-Brocks syndrome Alliance Townes-Brocks syndrome 1 107480
1 - 2 of 2
Associated With sall1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR013087 Zinc finger C2H2-type
Family IPR051565 Sal C2H2-type zinc-finger
Homologous_superfamily IPR036236 Zinc finger C2H2 superfamily
1 - 3 of 3
Domain Details Per Protein
Protein Additional Resources Length Sal C2H2-type zinc-finger Zinc finger C2H2 superfamily Zinc finger C2H2-type
UniProtKB:F8W3Q2 InterPro 1203
1 - 1 of 1
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA sall1b-201 (1) Ensembl 4,574 nt
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations