Gene

rnd3a

ID
ZDB-GENE-010319-40
Name
Rho family GTPase 3a
Symbol
rnd3a Nomenclature History
Previous Names
  • rnd3 (1)
  • arhe
  • fc39h07
  • id:ibd2712
  • id:ibd2919
  • rho8 (1)
  • wu:fc39h07
  • zgc:73080
Type
protein_coding_gene
Location
Chr: 22 Mapping Details/Browsers
Description
Predicted to enable GTP binding activity; GTPase activity; and protein kinase binding activity. Predicted to be involved in actin filament organization; regulation of actin cytoskeleton organization; and signal transduction. Predicted to act upstream of or within small GTPase-mediated signal transduction. Predicted to be located in endomembrane system and membrane. Predicted to be active in cytosol and plasma membrane. Is expressed in several structures, including anterior neural keel; mesoderm; musculature system; nervous system; and neural plate. Orthologous to human RND3 (Rho family GTPase 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
12 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa44983Allele with one point mutationUnknownUnknownENU
European Zebrafish Resource Center (EZRC) (order this)
Zebrafish International Resource Center (ZIRC) (order this)
1 - 1 of 1
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Sequence Targeting Reagents
No data available
Human Disease
Associated With rnd3a Human Ortholog
No data available
Associated With rnd3a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR005225 Small GTP-binding domain
Family IPR001806 Small GTPase
Family IPR003578 Small GTPase Rho
Family IPR041843 Rho-related GTP-binding protein RhoE
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
1 - 5 of 5
Domain Details Per Protein
Protein Additional Resources Length P-loop containing nucleoside triphosphate hydrolase Rho-related GTP-binding protein RhoE Small GTPase Small GTPase Rho Small GTP-binding domain
UniProtKB:Q6PC71 InterPro 243
1 - 1 of 1
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rnd3a-201 (1)
Ensembl
Ensembl 4,501 nt
ZFIN BLAST
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH73-60I13ZFIN Curated Data
EncodesESTfc39h07
EncodesESTibd2712
EncodesESTibd2919
EncodescDNAMGC:73080ZFIN Curated Data
1 - 5 of 5
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:NM_199522 (1)2044 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:CU459063 (2)99809 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:Q6PC71 (1)243 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
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