Gene
or42d2
- ID
- ZDB-GENE-010308-11
- Name
- odorant receptor, family 42, subfamily D, member 2
- Symbol
- or42d2 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Description
- Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be active in membrane. Orthologous to several human genes including OR1E1 (olfactory receptor family 1 subfamily E member 1); OR1E2 (olfactory receptor family 1 subfamily E member 2); and OR1E3 (olfactory receptor family 1 subfamily E member 3 (gene/pseudogene)).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | GPCR, rhodopsin-like, 7TM | G protein-coupled receptor, rhodopsin-like | Olfactory receptor | Olfactory receptor 51/52/56-like |
|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AHF2 | InterPro | 330 | ||||
| UniProtKB:Q9I8Z1 | InterPro | 314 |
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| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
or111-9-201
(1)
|
Ensembl | 1,174 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-133D24 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_131745 (1) | 945 nt | ||
| Genomic | GenBank:AL845428 (1) | 157787 nt | ||
| Polypeptide | UniProtKB:A0A8M3AHF2 (1) | 330 aa |
No data available
- Olender, T., Jones, T.E.M., Bruford, E., Lancet, D. (2020) A unified nomenclature for vertebrate olfactory receptors. BMC Evolutionary Biology. 20:42
- Saraiva, L.R., Ahuja, G., Ivandic, I., Syed, A.S., Marioni, J.C., Korsching, S.I., Logan, D.W. (2015) Molecular and neuronal homology between the olfactory systems of zebrafish and mouse. Scientific Reports. 5:11487
- Niimura, Y. (2009) On the Origin and Evolution of Vertebrate Olfactory Receptor Genes: Comparative Genome Analysis Among 23 Chordate Species. Genome biology and evolution. 1:34-44
- Alioto, T.S., and Ngai, J. (2005) The odorant receptor repertoire of teleost fish. BMC Genomics. 6:173
- Niimura, Y., and Nei, M. (2005) Evolutionary dynamics of olfactory receptor genes in fishes and tetrapods. Proceedings of the National Academy of Sciences of the United States of America. 102(17):6039-6044
- Kratz, E., Dugas, J.C., and Ngai, J. (2002) Odorant receptor gene regulation: implications from genomic organization. Trends in genetics : TIG. 18(1):29-34
- Dugas, J.C. and Ngai, J. (2001) Analysis and characterization of an odorant receptor gene cluster in the zebrafish genome. Genomics. 71(1):53-65
- Mori, T., Sakai, M., Matsuoka, I., and Kurihara, K. (2000) Analysis of promoter activity of 5'-upstream regions of zebrafish olfactory receptor genes. Biological & pharmaceutical bulletin. 23(2):165-173
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