Gene
hoxc9a
- ID
- ZDB-GENE-000328-5
- Name
- homeobox C9a
- Symbol
- hoxc9a Nomenclature History
- Previous Names
-
- BZ-39
- bz39
- hoxc9
- zgc:109844
- Type
- protein_coding_gene
- Location
- Chr: 23 Mapping Details/Browsers
- Description
- Predicted to have DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of vasculogenesis and positive regulation of lymphangiogenesis. Predicted to localize to nucleus. Is expressed in several structures, including CNS interneuron; axial vasculature; neural tube; pectoral fin bud; and spinal cord. Orthologous to human HOXC9 (homeobox C9).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 13 figures from 6 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:109844 (10 images)
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Stoll et al., 2013
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR017970 | Homeobox, conserved site |
| Domain | IPR001356 | Homeobox domain |
| Domain | IPR006711 | Hox9, N-terminal activation domain |
| Domain | IPR020479 | Homeobox domain, metazoa |
| Family | IPR017112 | Homeobox protein HXA9/HXB9/HXC9 |
| Homologous_superfamily | IPR009057 | Homeobox-like domain superfamily |
Domain Details Per Protein
| Protein | Length | Homeobox, conserved site | Homeobox domain | Homeobox domain, metazoa | Homeobox-like domain superfamily | Homeobox protein HXA9/HXB9/HXC9 | Hox9, N-terminal activation domain |
|---|---|---|---|---|---|---|---|
|
UniProtKB:Q9YGS6
|
260 | ||||||
|
UniProtKB:A2BE65
|
270 |
| Type | Name | Annotation Method | Length (nt) | Analysis |
|---|---|---|---|---|
| mRNA |
hoxc9a-201
(1)
|
Havana | 1170 nt |
Interactions and Pathways
No data available
Plasmids