Genomic Feature

lri90

ID
ZDB-ALT-220321-5
Name
lri90
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Sakaguchi Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 11
Variants
Variant Type
Small Deletion
Variant Location
Chr 11: 141511 - 141517 (GRCz11) (1) Details
Nucleotide change
ACCAGCT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted in Exon 1 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AGGGTTATTAGATCCTGAAATCTCAGATTGCACATAACATCAGCTGTGAGTCAGTAATGTGTGCAGTCTCAGGACAGACACTGACGCGTCACTCAACCAGAACAGAAGATACTTTGAAGAATGTTGAACACCTGTAGCCATTCACTTCCATTGTAGGAAAATAAATACTGTAGAGGTCAATGGTTACAGGTTTTCCTTTGTGTTCAACTGAAGAAAGAAACTCATTAAGGGTTTGAAATGCCTGAGGAAGTGTGTATGATGACAGTGTTAAAGTTATGTGTGAACTAACCCTTTAAAGGCACTTCATCAGACTGAGCAGTGAGTGTGATGGGCGAGAGAGGATCGACACAGTGAACTCAGATTAGAGAAAGCTGAGAGCGGAAGTGGAGCGCTGCCTCCGCCTGCTGAACGTGTAGATTTCACTTCTGCTCCATCTCCGAGCTCTTCAGTCTGCACACACACACACACACACACACACTCACACACACTCACCATGGCCT
ACCAGCT/- GAAACTGGCGGAGAAGCTGCTGATCCTCCGTGACCGTGGGCAGGGTGTGCTGGTGCGCATCAACCACATCAAGAAGGTGAGCGGAGCCGCTTCTGAAGTCCTCAGTCCAGATCCACACGCTGAAACCCTCTGCTTTATACGTTCCTGCTGCTCCTCACTGTGGACCTGACTGAGCGATGCTGGAAACAGTGTCCGGTGTAGTCTAACAGATCTTAGAAATGAGGGATATGTCTGTCTGCTCTGAGAACTGCTCTGTGTACAGCTGTTCAGACACGCGTGCTCGTCTTCTTCATATAATACACCTGCATTATTCACCTTAAAGAGTCGTAATGGCAGCATCAGTGGCAGGAAGCGGCTTCACTGCTCTGTGTTTTTCATTGGTTTATGATGTGTGCTCTTCTGTTCTGGTTTTCTTCATGTAGTTTGGAGAGTTTGTGCTGTGTTTTCTGCTTTGTGTTTTCTGAAGAAAGTCATGTTGAGTGTCAGTTTTGGAGAGAAAG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
nckap1llri90/+HeterozygousUnknownFig 5 with image from Ghaffari et al., 2021
nckap1llri90/+; ki109Tg/ki109TgComplexFig 5 with image from Ghaffari et al., 2021
nckap1llri90/+; ki109Tg/ki109Tg; um14TgComplexFig 5 with image from Ghaffari et al., 2021
nckap1llri90/+; um14TgComplex2 figures with image from Ghaffari et al., 2021
1 - 4 of 4
Show
Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.