Genomic Feature
ecn2
- ID
- ZDB-ALT-190830-5
- Name
- ecn2
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Zhen-Yu Du Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 18: 8349137 - 8349141 (GRCz11) (1) Details
- Nucleotide change
- TATGC/-
- Variant Notes
-
exon 2 deletion of TATGC at 78bp , premature stop codon at amino acid 82aa
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp deleted in Exon 2 (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTTTCTATCTATCTATCTATCTATCTATCTATCCATCCATCTATCTATCTATCTATCTAGCTATATTATTCCATCCATCCATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCAACTAGCTATCTATCTAATGAAAGTCATCTTTTTCTTGTTTTGAGCAGAACAGTGTTCTGACCGGTGTTTACCCTGCCAGTCCTTCAAGCTGGTTATTTGTAGTTATTGCTATAATGAGCACCATG
TATGC/- CAGGATCGACCCCTCCATGGGCACGATTGATAAAATCAAGACATCTCTACCAGTGAGGTAAATTAACAGCAGATCTATGAAAGATCTATGTTAGATAAAAACAGATGCATAAAGCTGGGAACATGGATGATTAGTGCATAAAATACCCGTGTAGATGGCATGCAAATGATTTTTAAACTGATTTTTGTATTTATAATGTATAATAAGTTAAAATTCTGATAAAGAGAAAACATTTAGGCAGTGAATATCAGTGTTTTGTTAAGGATTGTAGGTCTTGGACCACATCATTTTGCCTGATATGTTTGATCAAAAATATAAATACAACTGATATTACCAGTTCTCGGTACTGATTGGGCAACACATATATTTTATTTACTGTTAAGCAATGGATTTGGCAGCTTCGGTTTCTATTTACAGATTCATTCAGTTGAATTTGTGCTTCATCAGATGAAGCACGTTACACATTGAAATAATTTTTTGCCAACTACTCAGTCAGGGAC - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
cpt1becn2/ecn2 | Homozygous | ♀+/- ♂+/- | Fig. 3 from Lu et al., 2019 | ||
cpt1becn2/ecn2 | Homozygous | ♀-/- ♂-/- | 6 figures from Li et al., 2020 | 3 figures from Li et al., 2020 |
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Supplemental Information
- Genotyping protocol
- None
- Zhou, W.H., Luo, Y., Li, R.X., Degrace, P., Jourdan, T., Qiao, F., Chen, L.Q., Zhang, M.L., Du, Z.Y. (2023) Inhibition of mitochondrial fatty acid β-oxidation activates mTORC1 pathway and protein synthesis via Gcn5-dependent acetylation of raptor in zebrafish. The Journal of biological chemistry. 299(10):105220
- Qiao, F., Tan, F., Li, L.Y., Lv, H.B., Chen, L., Du, Z.Y., Zhang, M.L. (2021) Alteration and the Function of Intestinal Microbiota in High-Fat-Diet- or Genetics-Induced Lipid Accumulation. Frontiers in microbiology. 12:741616
- Li, L.Y., Li, J.M., Ning, L.J., Lu, D.L., Luo, Y., Ma, Q., Limbu, S.M., Li, D.L., Chen, L.Q., Lodhi, I.J., Degrace, P., Zhang, M.L., Du, Z.Y. (2020) Mitochondrial Fatty Acid β-Oxidation Inhibition Promotes Glucose Utilization and Protein Deposition through Energy Homeostasis Remodeling in Fish. The Journal of nutrition. 150(9):2322-2335
- Lu, D.L., Ma, Q., Wang, J., Li, L.Y., Han, S.L., Limbu, S.M., Li, D.L., Chen, L.Q., Zhang, M.L., Du, Z.Y. (2019) Fasting enhances cold resistance in fish through stimulating lipid catabolism and autophagy. The Journal of physiology. 597(6):1585-1603
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