Genomic Feature
ct814
- ID
- ZDB-ALT-131125-3
- Name
- ct814
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Prober Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 13: 1016025 - 1016037 (GRCz11) (1) Details
- Nucleotide change
- GACGCCAATATCA/CT
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 2 bp inserted / 13 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TAGCATAAATAATTGAATCAGATTGGACCATTAGCATTTTGATCAGAAATGACCAAAGAGTTTTTATAATTCCCATATTTAAATATTCACTTCCATAGTTACACTAAGACCAACGGAAAAATGAAAAGTTACTATTTTATTGATATTATGCAGCACTTTTAGCTTAGCTTAGCATAGGTCATTGAATCAGATTAGACCATTAGCATCTTGCTCCAAAAATGTAAAAGAATTAACTTTTCACTTTTGATCTGTCATCGCACAAGATAAAACAATGTCAAGCTTTAAATACGAAAATGACCAAATCTCTCTTTATGAGCGTAATGCTAATGGTCTAATCCGATTCAATGATCTATGCTAAGCTAAGCTAAAAGTGCTAAACCAACTGAATAGATTCAAAACTCCACTGTTTAATTTGAGTTATGAATTGAATGAAAATAAATTGTGTGTTTCTTTATTTACAGTACCTAATTACTTTGCATCTCACAGAAACAGCCATGCAG
GACGCCAATATCA/CT GCCACGTGGCAGCTGTATACGTGAGTCCTCACAGTCCCGTTCCTGTTCTGGATGTCCATGACTACACAGACTTTTACGACATGATGGACTACGGGGTCCCGGCGGAGGAGATGCCGGACACCACGCAGGGCCTGGCCTATTTTGTGGCCACCATCGTCATCGGTGTGGTTCTGGTCTGCATCATGCTGGTGTGCGGATTCGGAAACTTTGTGTTTATCGCCACTCTGGCCCGATATAAGAAGCTCAGAAACCTGACCAATCTGCTGATCGCCAACCTGGCCGTGTCGGACTTCATCGTGGCCGTGGTCTGTTGCCCGTTCCTGGTGGATTATTATGTGGTCAAGCAGCTGTCGTGGGATCATGGGAAGGTTTTGTGCGCCTCAGTTAATTACCTCAGGACTGTGTCTCTGTATGTGTCCACCAACGCCTTACTGGCCATCGCTGTCGACAGGTCAGTGGGATTTACATACTGTATACTAACCATGCACAAGATTAACATT - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
prokr1bct814/ct814 | Homozygous | ♀+/- ♂+/- | Fig. 6 from Bassi et al., 2020 | Fig. 6 from Bassi et al., 2020 | |
prokr1bct814/ct814; zf103Tg | Complex | 2 figures from Bassi et al., 2020 |
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Supplemental Information
- Genotyping protocol
- None
- Bassi, I., Luzzani, F., Marelli, F., Vezzoli, V., Cotellessa, L., Prober, D.A., Persani, L., Gothilf, Y., Bonomi, M. (2020) Knocking-down of the Prokineticin receptor 2 affects reveals its complex role in the regulation of the hypothalamus-pituitary-gonadal axis in the zebrafish model. Scientific Reports. 10:7632
- Chen, S., Oikonomou, G., Chiu, C.N., Niles, B.J., Liu, J., Lee, D.A., Antoshechkin, I., and Prober, D.A. (2013) A large-scale in vivo analysis reveals that TALENs are significantly more mutagenic than ZFNs generated using context-dependent assembly. Nucleic acids research. 41(4):2769-2778
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