Genomic Feature

hu3568

ID
ZDB-ALT-130729-6
Name
hu3568
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
adult males treated with ENU
Lab of Origin
Cuppen Lab
Current Source
Other Pages
Notes
Comment Citation
hu3568 carries a threonine to alanine point mutation in myd88 creating a  ... van der Vaart et al., 2013
Genome Browser
Genome Build: GRCz11Chromosome: 24
Variants
Variant Type
Point Mutation
Variant Location
Chr 24: 20192465 (GRCz11) (1) Details
Nucleotide change
A/T
Variant Notes
hu3568 carries a threonine to alanine point mutation in myd88 creating a  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
T>A (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation: Leu>Stop (1)
Sequences
Flanking Sequence
TTTATTGACATGAAAATATCAAATTCTTTCCTTTTCTTTTCGGCTTAGTCCCTTAAAATAAAAAATAACAAGCATAATAAAAGTTTACTTTACCCAGAGAAGGATTAATTCTTTTTTTTCCTGTTGAACACAAAATAAGATACTTTAAAAAATGTTGAAAACCTGTAACCATTGACTTGCATAGTAATTGTTTGTCCTTCTATGGGTGTCAATGGTTGCAGAGTTTAAAAACATTCAGCAAAATATCTTCTTTTGTGTTCAATATGAAAAGGAAACTCATATAGATTTGGAACCACCTGAGGTTGAGTAATAGTGAGATAATTTTCATTTTTGGGTGAACTATCCCTTTAATAACAACGACAAAAAATAATATTTGATAATGCAACAATTAAATAATATATTGAAGCGAACAAAGAAAAGCAATAAACACATGGAATTTAGATGACGTACCTAAAATTTCTTTGAGCTCGGATATGACATCTTTCCTTTCAGCTTTTTCT
A/T AAATCGACAGTAAATTCGCTACTGTGGCGTCTGGACGAGTTTCCCAGTCCGTCAAGACCTTTTCAAAGGGACATTCTCTTTTCTCGAAGTTTTTGATCTCCAGGTACGTGAAGTCCATCAGTTCTGCCACTGTCCTCCAGTCTGCCGCCACAGTGTTTGTTGGGTTTAGGAACAGACCCAGTTTCTTTCGGAAACTGCAGTTTAAAGCTGTTACTGGAATCGCCTCATGGTCTATACTTAACTTTGATGCCATATTTATTAGCAAAACCTCTGTTATCCAGCGAAGTTGTTGTATATCTCCGCGTTACCCCGAAAAGAAACGTGAATTAAAAAAGTAAAATAGTTTAACGTTAATATATTTTAAGTTGTCATTTCCTGAAGTTACGGATATACTGAACTTTAAGAAAACAAATTTACGAACTGAAGTGCACCACGCAAGTTGGCAAGTTCACGTTACAACTACACAACAAGCAAAGCGAAGATTGAGGAAATGCTAGCTA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
myd88hu3568/hu3568Homozygous♀+/- ♂+/-7 figures with image from 3 publications7 figures with image from 5 publications
myd88hu3568/hu3568Homozygous♀-/- ♂-/-Fig. 3 from Troll et al., 2018
myd88hu3568/hu3568 (AB)Homozygous♀-/- ♂-/-5 figures with image from van der Vaart et al., 20134 figures with image from van der Vaart et al., 2013
myd88hu3568/hu3568 (AB)Homozygous♀+/- ♂+/-
myd88hu3568/hu3568 (AB/TL)HomozygousUnknownFig. 1 with image from Koch et al., 2018
myd88hu3568/+HeterozygousUnknownFig. 3 from Troll et al., 2018
myd88hu3568/hu3568; gl22TgComplexFig. 3 from Cunha et al., 2020
myd88hu3568/hu3568; gl22Tg; ue6TgComplex2 figures from Cunha et al., 2020
myd88hu3568/hu3568; i114TgComplexFig. 1 with image from Koch et al., 2018
myd88hu3568/hu3568; i114TgComplexFig. 5 with image from Elks et al., 2014
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Supplemental Information
Genotyping protocol
None
Citations
1 - 10 of 29
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