Sato et al., 2009 - Temporal pattern of loss/persistence of duplicate genes involved in signal transduction and metabolic pathways after teleost-specific genome duplication. BMC Evolutionary Biology   9:127 Full text @ BMC Evol. Biol.
155 Genes / Markers
Marker Type Symbol Name
Gene a1cf apobec1 complementation factor
Gene aclya ATP citrate lyase a
Gene aclyb ATP citrate lyase b
Gene aco1 aconitase 1, soluble
Gene aco2 aconitase 2, mitochondrial
Gene adcy3b adenylate cyclase 3b
Gene adcy6a adenylate cyclase 6a
Gene adcy7 adenylate cyclase 7
Gene adcy8 adenylate cyclase 8 (brain)
Gene araf A-Raf proto-oncogene, serine/threonine kinase
Gene arrb2a arrestin, beta 2a
Gene arrb2b arrestin, beta 2b
Gene atf4a activating transcription factor 4a
Gene atf4b activating transcription factor 4b
Gene braf B-Raf proto-oncogene, serine/threonine kinase
Gene cacna1aa calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a
Gene cacna1ab calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b
Gene cacna1ba calcium channel, voltage-dependent, N type, alpha 1B subunit, a
Gene cacna1c calcium channel, voltage-dependent, L type, alpha 1C subunit
Gene calm1a calmodulin 1a
Gene calm1b calmodulin 1b
Gene calm2a calmodulin 2a (phosphorylase kinase, delta)
Gene calm2b calmodulin 2b, (phosphorylase kinase, delta)
Gene calm3b calmodulin 3b (phosphorylase kinase, delta)
Gene camk2b1 calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1
Gene camk2b2 calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2
Gene camk2d2 calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2
Gene camk2g2 calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 2
Gene camk4 calcium/calmodulin-dependent protein kinase IV
Gene chp1 calcineurin-like EF-hand protein 1
Gene clca1 chloride channel accessory 1
Gene clybl citrate lyase beta like
Gene cnga3a cyclic nucleotide gated channel subunit alpha 3a
Gene cnga3b cyclic nucleotide gated channel subunit alpha 3b
Gene cngb1a cyclic nucleotide gated channel subunit beta 1a
Gene cngb1b cyclic nucleotide gated channel subunit beta 1b
Gene crebbpa CREB binding protein a
Gene crebbpb CREB binding protein b
Gene cs citrate synthase
Gene dkk1a dickkopf WNT signaling pathway inhibitor 1a
Gene dkk1b dickkopf WNT signaling pathway inhibitor 1b
Gene dldh dihydrolipoamide dehydrogenase
Gene dlst dihydrolipoamide S-succinyltransferase
Gene ep300a E1A binding protein p300 a
Gene ep300b E1A binding protein p300 b
Gene gc2 guanylyl cyclase 2
Gene gnal guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
Gene gnaq guanine nucleotide binding protein (G protein), q polypeptide
Gene gnas GNAS complex locus
Gene gnat1 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1
Gene gnat2 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2
Gene gnb1b guanine nucleotide binding protein (G protein), beta polypeptide 1b
Gene gnb3a guanine nucleotide binding protein (G protein), beta polypeptide 3a
Gene gnb3b guanine nucleotide binding protein (G protein), beta polypeptide 3b
Gene gng13a guanine nucleotide binding protein (G protein), gamma 13a
Gene gng13b guanine nucleotide binding protein (G protein), gamma 13b
Gene gng2 guanine nucleotide binding protein (G protein), gamma 2
Gene gng3 guanine nucleotide binding protein (G protein), gamma 3
Gene gng4 guanine nucleotide binding protein (G protein), gamma 4
Gene gria1a glutamate receptor, ionotropic, AMPA 1a
Gene gria1b glutamate receptor, ionotropic, AMPA 1b
Gene grin1a glutamate receptor, ionotropic, N-methyl D-aspartate 1a
Gene grin1b glutamate receptor, ionotropic, N-methyl D-aspartate 1b
Gene grin2ba glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate a
Gene grin2bb glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b
Gene grin2ca glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
Gene grk3 G protein-coupled receptor kinase 3
Gene grm1a glutamate receptor, metabotropic 1a
Gene grm1b glutamate receptor, metabotropic 1b
Gene grm5a glutamate receptor, metabotropic 5a
Gene grm5b glutamate receptor, metabotropic 5b
Gene guca1aa guanylate cyclase activator 1Aa
Gene guca1b guanylate cyclase activator 1B
Gene gucy2d guanylate cyclase 2D, retinal
Gene hmcn1 hemicentin 1
Gene hrasa HRas proto-oncogene, GTPase a
Gene hrasb HRas proto-oncogene, GTPase b
Gene idh1 isocitrate dehydrogenase (NADP(+)) 1
Gene idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha
Gene idh3b isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
Gene idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma
Gene itpr1a inositol 1,4,5-trisphosphate receptor, type 1a
Gene itpr1b inositol 1,4,5-trisphosphate receptor, type 1b
Gene itpr2 inositol 1,4,5-trisphosphate receptor, type 2
Gene itpr3 inositol 1,4,5-trisphosphate receptor, type 3
Gene ivns1abpa influenza virus NS1A binding protein a
Gene ivns1abpb influenza virus NS1A binding protein b
Gene kcnb1 potassium voltage-gated channel, Shab-related subfamily, member 1
Gene kras v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog
Gene map2k1 mitogen-activated protein kinase kinase 1
Gene map2k2a mitogen-activated protein kinase kinase 2a
Gene mapk1 mitogen-activated protein kinase 1
Gene mapk3 mitogen-activated protein kinase 3
Gene mdh1aa malate dehydrogenase 1Aa, NAD (soluble)
Gene mdh1ab malate dehydrogenase 1Ab, NAD (soluble)
Gene mmp15a matrix metallopeptidase 15a
Gene nras NRAS proto-oncogene, GTPase
Gene odr4 odr-4 GPCR localization factor homolog
Gene ogdha oxoglutarate dehydrogenase a
Gene pck1 phosphoenolpyruvate carboxykinase 1 (soluble)
Gene pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial)
Gene pcxa pyruvate carboxylase a
Gene pcxb pyruvate carboxylase b
Gene pdca phosducin a
Gene pdcb phosducin b
Gene pde1a phosphodiesterase 1A, calmodulin-dependent
Gene pde1cb phosphodiesterase 1C, calmodulin-dependent b
Gene phf5a PHD finger protein 5A
Gene pla2g4aa phospholipase A2, group IVAa (cytosolic, calcium-dependent)
Gene pla2g4ab phospholipase A2, group IVAb (cytosolic, calcium-dependent)
Gene plcb3 phospholipase C, beta 3 (phosphatidylinositol-specific)
Gene ppp1caa protein phosphatase 1, catalytic subunit, alpha isozyme a
Gene ppp1cbl protein phosphatase 1, catalytic subunit, beta isoform, like
Gene ppp1r12a protein phosphatase 1, regulatory subunit 12A
Gene ppp3cca protein phosphatase 3, catalytic subunit, gamma isozyme, a
Gene ppp3r1b protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b
Gene prkacab protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b
Gene prkacba protein kinase, cAMP-dependent, catalytic, beta a
Gene prkacbb protein kinase, cAMP-dependent, catalytic, beta b
Gene prkcba protein kinase C, beta a
Gene prkcbb protein kinase C, beta b
Gene prkg1a protein kinase cGMP-dependent 1a
Gene prkg1b protein kinase cGMP-dependent 1b
Gene prkg2 protein kinase cGMP-dependent 2
Gene prkg2l protein kinase cGMP-dependent 2, like
Gene prkx protein kinase X-linked
Gene ptgs2a prostaglandin-endoperoxide synthase 2a
Gene ptgs2b prostaglandin-endoperoxide synthase 2b
Gene rab32b RAB32b, member RAS oncogene family
Gene raf1b Raf-1 proto-oncogene, serine/threonine kinase b
Gene rap1aa RAP1A, member of RAS oncogene family a
Gene rap1ab RAP1A, member of RAS oncogene family b
Gene rapgef3 Rap guanine nucleotide exchange factor (GEF) 3
Gene rps6ka1 ribosomal protein S6 kinase a, polypeptide 1
Gene rps6ka2 ribosomal protein S6 kinase, polypeptide 2
Gene rps6ka3a ribosomal protein S6 kinase a, polypeptide 3a
Gene rps6ka3b ribosomal protein S6 kinase, polypeptide 3b
Gene rps6kal ribosomal protein S6 kinase a, like
Gene sdha succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
Gene sdhb succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
Gene sdhc succinate dehydrogenase complex, subunit C, integral membrane protein
Gene sdhda succinate dehydrogenase complex, subunit D, integral membrane protein a
Gene sdhdb succinate dehydrogenase complex, subunit D, integral membrane protein b
Gene si:dkey-206f10.1 si:dkey-206f10.1
Gene stxbp5b syntaxin binding protein 5b (tomosyn)
Gene sucla2 succinate-CoA ligase ADP-forming subunit beta
Gene suclg1 succinate-CoA ligase GDP/ADP-forming subunit alph
Gene suclg2 succinate-CoA ligase GDP-forming subunit beta
Gene tefa TEF transcription factor, PAR bZIP family member a
Gene tpra translocated promoter region a, nuclear basket protein
Gene tprb translocated promoter region b, nuclear basket protein
Gene trpm5 transient receptor potential cation channel, subfamily M, member 5
Gene xrcc6 X-ray repair complementing defective repair in Chinese hamster cells 6
Gene zc3h7bb zinc finger CCCH-type containing 7Bb
Gene znf319b zinc finger protein 319b
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