FIGURE SUMMARY
Title

Integrating Functional Analysis in the Next-Generation Sequencing Diagnostic Pipeline of RASopathies

Authors
Leung, G.K.C., Luk, H.M., Tang, V.H.M., Gao, W.W., Mak, C.C.Y., Yu, M.H.C., Wong, W.L., Chu, Y.W.Y., Yang, W.L., Wong, W.H.S., Ma, A.C.H., Leung, A.Y.H., Jin, D.Y., Chan, K.Y.K., Allanson, J., Lo, I.F.M., Chung, B.H.Y.
Source
Full text @ Sci. Rep.

Transient expression of RNA transcripts in zebrafish embryos. The injection dosage of each RNA transcript was optimised for comparison (RAF1: 50 pg/embryo; RIT1: 400 pg/embryo; A2ML1: 200 pg/embryo). A morphometric analysis was performed to compare the effect of the VUSs compared to the wild-type transcript at three dpf. Statistical significance was derived using a two-sided Fisher’s exact test to compare mutants with the corresponding WT. **p < 0.01; ***p < 0.001; ns: not significant. NIC: No injection control; (a) Proportion of zebrafish embryos with normal or diseased phenotypes. (b) Representative zebrafish embryos with a normal phenotype (c) craniofacial dysmorphism (d) gross malformations and (e) cardiac oedema.

Craniofacial assessment of zebrafish embryos. The zebrafish embryos were treated with Alcian blue and washed with acidic alcohol 3 dpf. The ratio of the width of the ceratohyal (x) to the tip of Meckel’s cartilage (y) was used as a measure of craniofacial defects. (a) Comparison of the x-to-y ratio between mutant and wild-type zebrafish embryos. The data are the mean ± SD. Statistical significance was derived using an unpaired t-test comparing the mutants with the corresponding WT. **p < 0.01; ****p < 0.0001; ns: not significant. NIC: No injection control. The number in bold represents the total count of zebrafish embryos in the experimental group. (b) Alcian-blue stained cartilage in the zebrafish. The x-axis shows the width of the ceratohyal, and the y-axis shows the length of the tip of Meckel’s cartilage. (c) Representative embryos with different x-to-y ratios.

Structural assessment of cardiac tubes by in situ hybridization of cmlc1. Statistical significance was derived using a two-sided Fisher’s exact test to compare mutants with the corresponding WT. **p < 0.01; ns: not significant. (a) The proportion of zebrafish embryos with a normal or deformed heart tube structure. (b) Representative embryos with a normal and (c) deformed heart tube.

Acknowledgments
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