FIGURE SUMMARY
Title

The dystrotelin, dystrophin and dystrobrevin superfamily: new paralogues and old isoforms

Authors
Jin, H., Tan, S., Hermanowski, J., Bohem, S., Pacheco, S., McCaule, J.M., Greener, M.J., Hinits, Y., Hughes, S.M., Sharpe, P.T., Roberts, R.G.,
Source
Full text @ BMC Genomics

DRP2 and vertebrate dystrobrevins. A) Relationship between DRP2, Dp116 and G-utrophin. Alignment of N-terminal DRP2 sequences from a range of animals, together with selected dystrophin Dp116 and G-utrophin sequences. Accession numbers: H. sapiens DRP2, [GenBank:U43519]; Ornithorhyncus anatinus DRP2, [GenBank:BK005803]; G. gallus DRP2, [GenBank:DR425253]; X. tropicalis DRP2, [GenBank:CX826467];D. rerio DRP2, [GenBank:DQ443728]; S. canicula DRP2, [GenBank:U43517]; H. sapiens Dp116, [GenBank:NM_004014]; D. rerio Dp116, [GenBank:DQ788695]; H. sapiens G-utrophin, [GenBank:BP282211]; D. rerio G-utrophin, [GenBank:DQ788696]. Other sequences were predicted from publicly available genome data. Yellow boxes indicate helical regions (PSIPRED) annotated with spectrin repeat (SR) numbers for dystrophin and DRP2[24] where applicable. Exon numbers for dystrophin and DRP2 are given [4, 81]. B) Alignment of alternatively spliced region of selected dystrobrevin sequences. All full-length coding exons (numbering after mouse α-dystrobrevin, Ambrose et al., 1997 [33]) have been included (the status of the 9-bp exon 9 is not known for frog and torpedo α-dystrobrevin; exon 11 is only used in a C-terminally truncated α-dystrobrevin isoform). Exon boundaries only apply to vertebrate genes; the region corresponding to exons 8–14 is encoded by a single exon in the four invertebrates. Yellow boxes indicate syntrophin binding sites [39]. Accession numbers as follows; α-dystrobrevins: H. sapiens, [GenBank:NM_001390]; M. musculus, [GenBank:AF143543]; R. norvegicus, [GenBank:XM_226109]; X. laevis [GenBank:BC046265];D. rerio, [GenBank:DQ516343] and GenBank:DQ516344]; T. californica, [GenBank:L06945]; β-dystrobrevins:H. sapiens, [GenBank:Y15722]; M. musculus, [GenBank:Y15742]; R. norvegicus, [GenBank:BC081889]; D. rerio, [GenBank:DQ516345]; D. rerio γ-dystrobrevin, [GenBank:DQ516346]; D. melanogaster dystrobrevin, [GenBank:AF277387]; C. elegans dystrobrevin, [GenBank:NP_490860]; S. mansoni dystrobrevin, [GenBank:DQ431251]. Other sequences were predicted from publicly available genome and EST data. C) Results of in situ hybridisation of probes complementary to the 3′UTRs of zebrafish dystrophin and γ-dystrobrevin transcripts. Wholemount 24 hpf embryos are shown, anterior to the left. The dystrophin staining of vertical myosepta, comparable to that previously described [32], is similar to that obtained with γ-dystrobrevin.

EXPRESSION / LABELING:
Genes:
Fish:
Anatomical Term:
Stage: Prim-5
Acknowledgments
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