ZFIN Publication ID PubMed ID Authors Title Journal Year Volume Pages
ZDB-PUB-040217-2 12477932 Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences Proceedings of the National Academy of Sciences of the United States of America 2002 99(26) 16899-903
ZDB-PUB-100119-19 20080584 Zhang, J., Piontek, J., Wolburg, H., Piehl, C., Liss, M., Otten, C., Christ, A., Willnow, T.E., Blasig, I.E., and Abdelilah-Seyfried, S. Establishment of a neuroepithelial barrier by Claudin5a is essential for zebrafish brain ventricular lumen expansion Proceedings of the National Academy of Sciences of the United States of America 2010 107(4) 1425-1430
ZDB-PUB-100730-3 20653957 Xie, J., Farage, E., Sugimoto, M., and Anand-Apte, B. A novel transgenic zebrafish model for blood-brain and blood-retinal barrier development BMC Developmental Biology 2010 10 76
ZDB-PUB-120327-3 22438865 Gomez, G., Lee, J.H., Veldman, M.B., Lu, J., Xiao, X., and Lin, S. Identification of Vascular and Hematopoietic Genes Downstream of etsrp by Deep Sequencing in Zebrafish PLoS One 2012 7(3) e31658
ZDB-PUB-130708-51 23726886 Baltzegar, D.A., Reading, B.J., Brune, E.S., and Borski, R.J. Phylogenetic revision of the claudin gene family Marine genomics 2013 11 17-26
ZDB-PUB-140127-7 24306108 Wang, Y., Pan, L., Moens, C.B., and Appel, B. Notch3 establishes brain vascular integrity by regulating pericyte number Development (Cambridge, England) 2014 141(2) 307-317
ZDB-PUB-140513-439 24586357 Rost, M.S., Sumanas, S. Hyaluronic acid receptor Stabilin-2 regulates Erk phosphorylation and arterial--venous differentiation in zebrafish PLoS One 2014 9 e88614
ZDB-PUB-140925-4 25250569 French, C.R., Seshadri, S., Destefano, A.L., Fornage, M., Arnold, C.R., Gage, P.J., Skarie, J.M., Dobyns, W.B., Millen, K.J., Liu, T., Dietz, W., Kume, T., Hofker, M., Emery, D.J., Childs, S.J., Waskiewicz, A.J., Lehmann, O.J. Mutation of FOXC1 and PITX2 induces cerebral small-vessel disease J. Clin. Invest. 2014 124(11) 4877-81
ZDB-PUB-150703-3 26137170 Guna, A., Butcher, N.J., Bassett, A.S. Comparative mapping of the 22q11.2 deletion region and the potential of simple model organisms Journal of neurodevelopmental disorders 2015 7 18
ZDB-PUB-150809-9 26253401 Yu, J.A., Castranova, D., Pham, V.N., Weinstein, B.M. Single cell analysis of endothelial morphogenesis in vivo Development (Cambridge, England) 2015 142(17) 2951-61
ZDB-PUB-160113-13 26748692 Wu, C.C., Kruse, F., Vasudevarao, M.D., Junker, J.P., Zebrowski, D.C., Fischer, K., Noël, E.S., Grün, D., Berezikov, E., Engel, F.B., van Oudenaarden, A., Weidinger, G., Bakkers, J. Spatially Resolved Genome-wide Transcriptional Profiling Identifies BMP Signaling as Essential Regulator of Zebrafish Cardiomyocyte Regeneration Developmental Cell 2016 36(1) 36-49
ZDB-PUB-160809-6 27499523 Monteiro, R., Pinheiro, P., Joseph, N., Peterkin, T., Koth, J., Repapi, E., Bonkhofer, F., Kirmizitas, A., Patient, R. Transforming Growth Factor β Drives Hemogenic Endothelium Programming and the Transition to Hematopoietic Stem Cells Developmental Cell 2016 38(4) 358-70
ZDB-PUB-161124-8 27879346 Gurung, R., Ono, Y., Baxendale, S., Lee, S.L., Moore, S., Calvert, M., Ingham, P.W. The Zebrafish frozen Mutant Is a Model for Human Myopathy Associated with Mutation of the Unconventional Myosin MYO18B Genetics 2017 205(2) 725-735
ZDB-PUB-170202-7 26950095 Braasch, I., Gehrke, A.R., Smith, J.J., Kawasaki, K., Manousaki, T., Pasquier, J., Amores, A., Desvignes, T., Batzel, P., Catchen, J., Berlin, A.M., Campbell, M.S., Barrell, D., Martin, K.J., Mulley, J.F., Ravi, V., Lee, A.P., Nakamura, T., Chalopin, D., Fan, S., Wcisel, D., Cañestro, C., Sydes, J., Beaudry, F.E., Sun, Y., Hertel, J., Beam, M.J., Fasold, M., Ishiyama, M., Johnson, J., Kehr, S., Lara, M., Letaw, J.H., Litman, G.W., Litman, R.T., Mikami, M., Ota, T., Saha, N.R., Williams, L., Stadler, P.F., Wang, H., Taylor, J.S., Fontenot, Q., Ferrara, A., Searle, S.M., Aken, B., Yandell, M., Schneider, I., Yoder, J.A., Volff, J.N., Meyer, A., Amemiya, C.T., Venkatesh, B., Holland, P.W., Guiguen, Y., Bobe, J., Shubin, N.H., Di Palma, F., Alföldi, J., Lindblad-Toh, K., Postlethwait, J.H. The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons Nature Genetics 2016 48(4) 427-37
ZDB-PUB-170214-96 26469318 Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. RFX transcription factors are essential for hearing in mice Nature communications 2015 6 8549
ZDB-PUB-170301-6 28242613 Münch, J., Grivas, D., González-Rajal, Á., Torregrosa-Carrión, R., de la Pompa, J.L. Notch signalling restricts inflammation and serpine1 expression in the dynamic endocardium of the regenerating zebrafish heart. Development (Cambridge, England) 2017 144(8) 1425-1440
ZDB-PUB-170311-10 28279709 Chetty, S.C., Rost, M.S., Enriquez, J.R., Schumacher, J.A., Baltrunaite, K., Rossi, A., Stainier, D.Y., Sumanas, S. Vegf Signaling Promotes Vascular Endothelial Differentiation by Modulating etv2 Expression Developmental Biology 2017 424(2) 147-161
ZDB-PUB-170610-6 28598490 Philip, A.M., Wang, Y., Mauro, A., El-Rass, S., Marshall, J.C., Lee, W.L., Slutsky, A.S., dos Santos, C.C., Wen, X.Y. Development of a zebrafish sepsis model for high-throughput drug discovery Molecular medicine (Cambridge, Mass.) 2017 23 134-148
ZDB-PUB-170721-11 28723572 Quillien, A., Abdalla, M., Yu, J., Ou, J., Zhu, L.J., Lawson, N.D. Robust Identification of Developmentally Active Endothelial Enhancers in Zebrafish Using FANS-Assisted ATAC-Seq Cell Reports 2017 20 709-720
ZDB-PUB-170805-14 28771527 Kim, J.G., Bae, S.J., Lee, H.S., Park, J.H., Kim, K.W. Claudin5a is required for proper inflation of Kupffer's vesicle lumen and organ laterality PLoS One 2017 12 e0182047
ZDB-PUB-180214-17 29437557 van Leeuwen, L.M., Evans, R.J., Jim, K.K., Verboom, T., Fang, X., Bojarczuk, A., Malicki, J., Johnston, S.A., van der Sar, A.M. A transgenic zebrafish model for the in vivo study of the blood and choroid plexus brain barriers using claudin 5. Biology Open 2018 7(2)
ZDB-PUB-180418-33 29651289 Hsu, A.Y., Gurol, T., Sobreira, T.J.P., Zhang, S., Moore, N., Cai, C., Zhang, Z.Y., Deng, Q. Development and Characterization of an Endotoxemia Model in Zebra Fish Frontiers in immunology 2018 9 607
ZDB-PUB-180607-11 29874129 Pollock, L.M., Xie, J., Bell, B.A., Anand-Apte, B. Retinoic acid signaling is essential for maintenance of the blood-retinal barrier FASEB journal : official publication of the Federation of American Societies for Experimental Biology 2018 32(10) 5674-5684
ZDB-PUB-190407-5 30953479 Pociute, K., Schumacher, J.A., Sumanas, S. Clec14a genetically interacts with Etv2 and Vegf signaling during vasculogenesis and angiogenesis in zebrafish BMC Developmental Biology 2019 19 6
ZDB-PUB-190810-3 31395869 Bonkhofer, F., Rispoli, R., Pinheiro, P., Krecsmarik, M., Schneider-Swales, J., Tsang, I.H.C., de Bruijn, M., Monteiro, R., Peterkin, T., Patient, R. Blood stem cell-forming haemogenic endothelium in zebrafish derives from arterial endothelium Nature communications 2019 10 3577
ZDB-PUB-191111-9 31705559 Chestnut, B., Sumanas, S. Zebrafish etv2 knock-in line labels vascular endothelial and blood progenitor cells Developmental Dynamics : an official publication of the American Association of Anatomists 2019 249(2) 245-261
ZDB-PUB-200606-5 32493965 Chestnut, B., Casie Chetty, S., Koenig, A.L., Sumanas, S. Single-cell transcriptomic analysis identifies the conversion of zebrafish Etv2-deficient vascular progenitors into skeletal muscle Nature communications 2020 11 2796
ZDB-PUB-200625-2 32576859 Weaver, M.L., Piedade, W.P., Meshram, N.N., Famulski, J.K. Hyaloid vasculature and mmp2 activity play a role during optic fissure fusion in zebrafish Scientific Reports 2020 10 10136
ZDB-PUB-200728-5 32703943 Lee, Y.R., Khan, K., Armfield-Uhas, K., Srikanth, S., Thompson, N.A., Pardo, M., Yu, L., Norris, J.W., Peng, Y., Gripp, K.W., Aleck, K.A., Li, C., Spence, E., Choi, T.I., Kwon, S.J., Park, H.M., Yu, D., Do Heo, W., Mooney, M.R., Baig, S.M., Wentzensen, I.M., Telegrafi, A., McWalter, K., Moreland, T., Roadhouse, C., Ramsey, K., Lyons, M.J., Skinner, C., Alexov, E., Katsanis, N., Stevenson, R.E., Choudhary, J.S., Adams, D.J., Kim, C.H., Davis, E.E., Schwartz, C.E. Mutations in FAM50A suggest that Armfield XLID syndrome is a spliceosomopathy Nature communications 2020 11 3698
ZDB-PUB-201217-6 33323504 Yang, Z., Wu, S., Fontana, F., Li, Y., Xiao, W., Gao, Z., Stephan, A., Affolter, M., Belting, H.G., Abdelilah-Seyfried, S., Zhang, J. The tight junctions protein Claudin-5 limits endothelial cell motility Journal of Cell Science 2020 134(1)
ZDB-PUB-210709-6 34234366 Metikala, S., Casie Chetty, S., Sumanas, S. Single-cell transcriptome analysis of the zebrafish embryonic trunk PLoS One 2021 16 e0254024
ZDB-PUB-210818-1 34400136 Fowler, G., French, D., Rose, A., Squires, P., Anecito da Silva, C., Ohata, S., Okamoto, H., French, C.R. Protein fucosylation is required for Notch dependent vascular integrity in zebrafish Developmental Biology 2021 480 62-68
ZDB-PUB-210910-13 34500089 Ahn, J.C., Hwang, S.J., Lee, H.J., Kim, K.W. Claudin-5a knockdown attenuates blood-neural barrier in zebrafish Comparative biochemistry and physiology. Toxicology & pharmacology : CBP 2021 250 109176
ZDB-PUB-210918-23 34531766 Yu, P., Li, Y., Zhong, G., Li, W., Chen, B., Zhang, J. Claudin-5 Affects Endothelial Autophagy in Response to Early Hypoxia Frontiers in Physiology 2021 12 737474
ZDB-PUB-220210-5 35137687 Paulissen, E., Palmisano, N.J., Waxman, J., Martin, B.L. Somite morphogenesis is required for axial blood vessel formation during zebrafish embryogenesis eLIFE 2022 11
ZDB-PUB-220323-30 35314737 Tsaryk, R., Yucel, N., Leonard, E.V., Diaz, N., Bondareva, O., Odenthal-Schnittler, M., Arany, Z., Vaquerizas, J.M., Schnittler, H., Siekmann, A.F. Shear stress switches the association of endothelial enhancers from ETV/ETS to KLF transcription factor binding sites Scientific Reports 2022 12 4795
ZDB-PUB-220524-3 35598417 Mu, X., Qi, S., Wang, H., Yuan, L., Wang, C., Li, Y., Qiu, J. Bisphenol analogues induced metabolic effects through eliciting intestinal cell heterogeneous response Environment International 2022 165 107287
ZDB-PUB-220607-4 35658877 Li, Y., Wang, C., Zhang, L., Chen, B., Mo, Y., Zhang, J. Claudin-5a is essential for the functional formation of both zebrafish blood-brain barrier and blood-cerebrospinal fluid barrier Fluids and barriers of the CNS 2022 19 40
ZDB-PUB-220731-1 35906287 Gurung, S., Restrepo, N.K., Chestnut, B., Klimkaite, L., Sumanas, S. Single-cell transcriptomic analysis of vascular endothelial cells in zebrafish embryos Scientific Reports 2022 12 13065
ZDB-PUB-220803-5 35917935 Paulissen, E., Martin, B.L. Myogenic regulatory factors myod and Myf5 are required for dorsal aorta formation and angiogenic sprouting Developmental Biology 2022 490 134-143
ZDB-PUB-221209-6 36477332 Deshwar, A.R., Cytrynbaum, C., Murthy, H., Zon, J., Chitayat, D., Volpatti, J., Newbury-Ecob, R., Ellard, S., Lango Allen, H., Yu, E.P., Noche, R., Walker, S., Scherer, S.W., Mahida, S., Elitt, C.M., Nicolas, G., Goldenberg, A., Saugier-Veber, P., Lecoquierre, F., Dabaj, I., Meddaugh, H., Marble, M., Keppler-Noreuil, K.M., Drayson, L., Barañano, K.W., Chassevent, A., Agre, K., Létard, P., Bilan, F., Le Guyader, G., Laquerrière, A., Ramsey, K., Henderson, L., Brady, L., Tarnopolsky, M., Bainbridge, M., Friedman, J., Capri, Y., Athayde, L., Kok, F., Gurgel-Giannetti, J., Ramos, L.L.P., Blaser, S., Dowling, J.J., Weksberg, R. Variants in CLDN5 cause a syndrome characterized by seizures, microcephaly and brain calcifications Brain : a journal of neurology 2022 146(6) 2285-2297
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