ZFIN Publication ID	PubMed ID	Authors	Title	Journal	Year	Volume	Pages
ZDB-PUB-040217-2	12477932	Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences	Proceedings of the National Academy of Sciences of the United States of America	2002	99(26)	16899-903
ZDB-PUB-100317-5	20211140	Tobin, D.M., Vary, J.C. Jr, Ray, J.P., Walsh, G.S., Dunstan, S.J., Bang, N.D., Hagge, D.A., Khadge, S., King, M.C., Hawn, T.R., Moens, C.B., and Ramakrishnan, L.	The lta4h Locus Modulates Susceptibility to Mycobacterial Infection in Zebrafish and Humans	Cell	2010	140(5)	717-730
ZDB-PUB-120207-9	22304914	Tobin, D.M., Roca, F.J., Oh, S.F., McFarland, R., Vickery, T.W., Ray, J.P., Ko, D.C., Zou, Y., Bang, N.D., Chau, T.T., Vary, J.C., Hawn, T.R., Dunstan, S.J., Farrar, J.J., Thwaites, G.E., King, M.C., Serhan, C.N., and Ramakrishnan, L.	Host genotype-specific therapies can optimize the inflammatory response to mycobacterial infections	Cell	2012	148(3)	434-446
ZDB-PUB-120802-6	22840407	Takaki, K., Cosma, C.L., Troll, M.A., and Ramakrishnan, L.	An in vivo platform for rapid high-throughput antitubercular drug discovery	Cell Reports	2012	2(1)	175-184
ZDB-PUB-130422-11	23582643	Roca, F.J., and Ramakrishnan, L.	TNF Dually Mediates Resistance and Susceptibility to Mycobacteria via Mitochondrial Reactive Oxygen Species	Cell	2013	153(3)	521-34
ZDB-PUB-130903-14	23934216	Enyedi, B., Kala, S., Nikolich-Zugich, T., and Niethammer, P.	Tissue damage detection by osmotic surveillance	Nature cell biology	2013	15(9)	1123-30
ZDB-PUB-141204-3	25470057	Oehlers, S.H., Cronan, M.R., Scott, N.R., Thomas, M.I., Okuda, K.S., Walton, E.M., Beerman, R.W., Crosier, P.S., Tobin, D.M.	Interception of host angiogenic signalling limits mycobacterial growth	Nature	2015	517(7536)	612-5
ZDB-PUB-150113-16	25573385	Knight, O.M., Van Der Kraak, G.	The role of eicosanoids in 17α, 20β-dihydroxy-4-pregnen-3-one-induced ovulation and spawning in Danio rerio	General and comparative endocrinology	2015	213	50-8
ZDB-PUB-150115-16	25582859	de Oliveira, S., Boudinot, P., Calado, Â., Mulero, V.	Duox1-Derived H2O2 Modulates Cxcl8 Expression and Neutrophil Recruitment via JNK/c-JUN/AP-1 Signaling and Chromatin Modifications	Journal of immunology (Baltimore, Md. : 1950)	2015	194(4)	1523-33
ZDB-PUB-150305-1	25738285	Okuno, T., Ishitani, T., Yokomizo, T.	Biochemical Characterization of Three BLT Receptors in Zebrafish	PLoS One	2015	10	e0117888
ZDB-PUB-160525-3	27219276	Chatzopoulou, A., Heijmans, J.P., Burgerhout, E., Oskam, N., Spaink, H.P., Meijer, A.H., Schaaf, M.J.	Glucocorticoid-induced attenuation of the inflammatory response in zebrafish	Endocrinology	2016	157(7)	2772-84
ZDB-PUB-160702-7	27363812	Tyrkalska, S.D., Candel, S., Angosto, D., Gómez-Abellán, V., Martín-Sánchez, F., García-Moreno, D., Zapata-Pérez, R., Sánchez-Ferrer, Á., Sepulcre, M.P., Pelegrín, P., Mulero, V.	Neutrophils mediate Salmonella Typhimurium clearance through the GBP4 inflammasome-dependent production of prostaglandins	Nature communications	2016	7	12077
ZDB-PUB-160811-9	27506797	Bhuiyan, M.S., Ellett, F., Murray, G.L., Kostoulias, X., Cerqueira, G.M., Schulze, K.E., Mahamad Maifiah, M.H., Li, J., Creek, D.J., Lieschke, G.J., Peleg, A.Y.	Acinetobacter baumannii phenylacetic acid metabolism influences infection outcome through a direct effect on neutrophil chemotaxis	Proceedings of the National Academy of Sciences of the United States of America	2016	113(34)	9599-604
ZDB-PUB-170303-4	28252024	Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G.	Evolution of complexity in the zebrafish synapse proteome	Nature communications	2017	8	14613
ZDB-PUB-170627-3	28650995	Mazon-Moya, M.J., Willis, A.R., Torraca, V., Boucontet, L., Shenoy, A.R., Colucci-Guyon, E., Mostowy, S.	Septins restrict inflammation and protect zebrafish larvae from Shigella infection	PLoS pathogens	2017	13	e1006467
ZDB-PUB-170921-13	28658259	Vincent, W.J.B., Harvie, E.A., Sauer, J.D., Huttenlocher, A.	Neutrophil derived LTB4 induces macrophage aggregation in response to encapsulated Streptococcus iniae infection	PLoS One	2017	12	e0179574
ZDB-PUB-180118-5	29336778	LeBert, D., Squirrell, J.M., Freisinger, C., Rindy, J., Golenberg, N., Frecentes, G., Gibson, A., Eliceiri, K.W., Huttenlocher, A.	Damage-induced reactive oxygen species regulate <i>vimentin</i> and dynamic collagen-based projections to mediate wound repair.	eLIFE	2018	7	e30703
ZDB-PUB-200210-3	32036144	Qiu, W., Liu, X., Yang, F., Li, R., Xiong, Y., Fu, C., Li, G., Liu, S., Zheng, C.	Single and joint toxic effects of four antibiotics on some metabolic pathways of zebrafish (Danio rerio) larvae	The Science of the total environment	2020	716	137062
ZDB-PUB-200606-32	32502410	Poplimont, H., Georgantzoglou, A., Boulch, M., Walker, H.A., Coombs, C., Papaleonidopoulou, F., Sarris, M.	Neutrophil Swarming in Damaged Tissue Is Orchestrated by Connexins and Cooperative Calcium Alarm Signals	Current biology : CB	2020	30(14)	2761-2776.e7
ZDB-PUB-210723-4	34292151	Isles, H.M., Loynes, C.A., Alasmari, S., Kon, F.C., Henry, K.M., Kadochnikova, A., Hales, J., Muir, C.F., Keightley, M.C., Kadirkamanathan, V., Hamilton, N., Lieschke, G.J., Renshaw, S.A., Elks, P.M.	Pioneer neutrophils release chromatin within in vivo swarms	eLIFE	2021	10	
ZDB-PUB-220622-11	35705722	Di Chiacchio, I.M., Gómez-Abenza, E., Paiva, I.M., de Abreu, D.J.M., Rodríguez-Vidal, J.F., Carvalho, E.E.N., Carvalho, S.M., Solis-Murgas, L.D., Mulero, V.	Bee pollen in zebrafish diet affects intestinal microbiota composition and skin cutaneous melanoma development	Scientific Reports	2022	12	9998
ZDB-PUB-221028-18	36291156	Gao, Y., Jin, Q., Gao, C., Chen, Y., Sun, Z., Guo, G., Peng, J.	Unraveling Differential Transcriptomes and Cell Types in Zebrafish Larvae Intestine and Liver	Cells	2022	11(20)	
ZDB-PUB-230115-1	36640321	Ma, Y., Hui, K.L., Gelashvili, Z., Niethammer, P.	Oxoeicosanoid signaling mediates early antimicrobial defense in zebrafish	Cell Reports	2023	42	111974111974
ZDB-PUB-230623-36	37347427	Liu, D., Jiang, Z., Deng, L., Li, H., Jiang, H.	Identification of an &#x3b1;-l-iduronidase (IDUA) M1T mutation in a Chinese family with autosomal recessive mucopolysaccharidosis I	Annals of the New York Academy of Sciences	2023	1526(1)	114-125