ZFIN Publication ID PubMed ID Authors Title Journal Year Volume Pages
ZDB-PUB-040217-2 12477932 Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences Proceedings of the National Academy of Sciences of the United States of America 2002 99(26) 16899-903
ZDB-PUB-050823-6 16109975 Woods, I.G., Wilson, C., Friedlander, B., Chang, P., Reyes, D.K., Nix, R., Kelly, P.D., Chu, F., Postlethwait, J.H., and Talbot, W.S. The zebrafish gene map defines ancestral vertebrate chromosomes Genome research 2005 15(9) 1307-1314
ZDB-PUB-060927-6 16990399 McClelland, G.B., Craig, P.M., Dhekney, K., and Dipardo, S. Temperature- and exercise-induced gene expression and metabolic enzyme changes in skeletal muscle of adult zebrafish (Danio rerio) The Journal of physiology 2006 577(2) 739-751
ZDB-PUB-070726-29 17640903 Wang, D., Jao, L.E., Zheng, N., Dolan, K., Ivey, J., Zonies, S., Wu, X., Wu, K., Yang, H., Meng, Q., Zhu, Z., Zhang, B., Lin, S., and Burgess, S.M. Efficient genome-wide mutagenesis of zebrafish genes by retroviral insertions Proceedings of the National Academy of Sciences of the United States of America 2007 104(30) 12428-12433
ZDB-PUB-090616-26 19500364 Sato, Y., Hashiguchi, Y., and Nishida, M. Temporal pattern of loss/persistence of duplicate genes involved in signal transduction and metabolic pathways after teleost-specific genome duplication BMC Evolutionary Biology 2009 9 127
ZDB-PUB-090828-29 19709642 Ngan, A.K., and Wang, Y.S. Tissue-specific transcriptional regulation of monocarboxylate transporters (MCTs) during short-term hypoxia in zebrafish (Danio rerio) Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology 2009 154(4) 396-405
ZDB-PUB-090828-4 19693513 Lemoine, C.M., Craig, P.M., Dhekney, K., Kim, J.J., and McClelland, G.B. Temporal and spatial patterns of gene expression in skeletal muscles in response to swim training in adult zebrafish (Danio rerio) Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology 2010 180(1) 151-160
ZDB-PUB-111027-54 22016516 Blechman, J., Amir-Zilberstein, L., Gutnick, A., Ben-Dor, S., and Levkowitz, G. The Metabolic Regulator PGC-1α Directly Controls the Expression of the Hypothalamic Neuropeptide Oxytocin The Journal of neuroscience : the official journal of the Society for Neuroscience 2011 31(42) 14835-14840
ZDB-PUB-111206-9 22140076 Zhao, S., Xie, P., Li, G., Jun, C., Cai, Y., Xiong, Q., and Zhao, Y. The proteomic study on cellular responses of the testes of zebrafish (Danio rerio) exposed to microcystin-RR Proteomics 2012 12(2) 300-312
ZDB-PUB-120702-20 22706793 Almeida, D.V., de Martinez Gaspar Martins, C., de Azevedo Figueiredo, M., Lanes, C.F., Bianchini, A., and Marins, L.F. Growth hormone transgenesis affects osmoregulation and energy metabolism in zebrafish (Danio rerio) Transgenic Research 2013 22(1) 75-88
ZDB-PUB-130221-6 23382537 Varshney, G.K., Lu, J., Gildea, D., Huang, H., Pei, W., Yang, Z., Huang, S.C., Schoenfeld, D.S., Pho, N., Casero, D., Hirase, T., Mosbrook-Davis, D.M., Zhang, S., Jao, L.E., Zhang, B., Woods, I.G., Zimmerman, S., Schier, A.F., Wolfsberg, T., Pellegrini, M., Burgess, S.M., and Lin, S. A large-scale zebrafish gene knockout resource for the genome-wide study of gene function Genome research 2013 23(4) 727-735
ZDB-PUB-130222-20 23399444 Thomas, J.K., Wiseman, S., Giesy, J.P., and Janz, D.M. Effects of chronic dietary selenomethionine exposure on repeat swimming performance, aerobic metabolism and methionine catabolism in adult zebrafish (Danio rerio) Aquatic toxicology (Amsterdam, Netherlands) 2013 130-131C 112-122
ZDB-PUB-131021-3 24055561 Almeida, D.V., Bianchini, A., and Marins, L.F. Growth hormone overexpression generates an unfavorable phenotype in juvenile transgenic zebrafish under hypoxic conditions General and comparative endocrinology 2013 194C 102-109
ZDB-PUB-140404-1 24476500 Motorykin, I., Traber, M.G., Tanguay, R.L., and Maier, C.S. Proteome-Driven Elucidation of Adaptive Responses to Combined Vitamin E and C Deficiency in Zebrafish Journal of Proteome Research 2014 13(3) 1647-56
ZDB-PUB-160226-5 26911965 Guh, Y.J., Yang, C.Y., Liu, S.T., Huang, C.J., Hwang, P.P. Oestrogen-related receptor α is required for transepithelial H+ secretion in zebrafish Proceedings. Biological sciences 2016 283(1825) 20152582
ZDB-PUB-160310-17 26951149 Hasumura, T., Meguro, S. Exercise quantity-dependent muscle hypertrophy in adult zebrafish (Danio rerio) Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology 2016 186(5) 603-14
ZDB-PUB-170222-12 28217809 Fei, F., Sun, S.Y., Yao, Y.X., Wang, X. [Generation and phenotype analysis of zebrafish mutations of obesity-related genes lepr and mc4r] Sheng li xue bao : [Acta physiologica Sinica] 2017 69 61-69
ZDB-PUB-170303-4 28252024 Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. Evolution of complexity in the zebrafish synapse proteome Nature communications 2017 8 14613
ZDB-PUB-170412-6 28397687 Sandoval, I.T., Delacruz, R.G., Miller, B.N., Hill, S., Olson, K.A., Gabriel, A.E., Boyd, K., Satterfield, C., Remmen, H.V., Rutter, J., Jones, D.A. A metabolic switch controls intestinal differentiation downstream of Adenomatous polyposis coli (APC). eLIFE 2017 6
ZDB-PUB-171001-5 28962524 Pettem, C.M., Weber, L.P., Janz, D.M. Cardiac and Metabolic Effects of Dietary Selenomethionine Exposure in Adult Zebrafish Toxicological sciences : an official journal of the Society of Toxicology 2017 159 449-460
ZDB-PUB-180927-7 30252882 Boskovic, S., Marín-Juez, R., Jasnic, J., Reischauer, S., El Sammak, H., Kojic, A., Faulkner, G., Radojkovic, D., Stainier, D.Y.R., Kojic, S. Characterization of zebrafish (Danio rerio) muscle ankyrin repeat proteins reveals their conserved response to endurance exercise PLoS One 2018 13 e0204312
ZDB-PUB-190422-21 31004809 Northam, C., LeMoine, C.M.R. Metabolic regulation by the PGC-1α and PGC-1β coactivators in larval zebrafish (Danio rerio) Comparative biochemistry and physiology. Part A, Molecular & integrative physiology 2019 234 60-67
ZDB-PUB-200528-11 32459962 Chen, L., Lam, J.C., Tang, L., Hu, C., Liu, M., Lam, P.K.S., Zhou, B. Probiotic modulation of lipid metabolism disorders caused by perfluorobutanesulfonate pollution in zebrafish Environmental science & technology 2020 54(12) 7494-7503
ZDB-PUB-200822-9 32818036 Zhu, Q.S., Wang, J., He, S., Liang, X.F., Xie, S., Xiao, Q.Q. Early leucine programming on protein utilization and mTOR signaling by DNA methylation in zebrafish (Danio rerio) Nutrition & metabolism 2020 17 67
ZDB-PUB-210314-8 33714130 Lee, H., Ko, E., Shin, S., Choi, M., Kim, K.T. Differential mitochondrial dysregulation by exposure to individual organochlorine pesticides (OCPs) and their mixture in zebrafish embryos Environmental pollution (Barking, Essex : 1987) 2020 277 115904
ZDB-PUB-211230-24 34950046 van de Pol, I.L.E., Hermaniuk, A., Verberk, W.C.E.P. Interacting Effects of Cell Size and Temperature on Gene Expression, Growth, Development and Swimming Performance in Larval Zebrafish Frontiers in Physiology 2021 12 738804
ZDB-PUB-220505-12 35504511 Ivantsova, E., Wengrovitz, A.S., Souders, C.L., Martyniuk, C.J. Developmental and behavioral toxicity assessment of glyphosate and its main metabolite aminomethylphosphonic acid (AMPA) in zebrafish embryos/larvae Environmental Toxicology and Pharmacology 2022 93 103873
ZDB-PUB-220527-14 35617428 Morgan, R., Andreassen, A.H., Åsheim, E.R., Finnøen, M.H., Dresler, G., Brembu, T., Loh, A., Miest, J.J., Jutfelt, F. Reduced physiological plasticity in a fish adapted to stable temperatures Proceedings of the National Academy of Sciences of the United States of America 2022 119 e2201919119
ZDB-PUB-220608-6 35670765 Kurchaba, N., Charette, J.M., LeMoine, C.M.R. Metabolic consequences of PGC-1α dysregulation in adult zebrafish muscle American journal of physiology. Regulatory, integrative and comparative physiology 2022 323(3) R319-R330
ZDB-PUB-240729-17 39069827 Wang, J.X., Zhang, Y.Y., Qian, Y.C., Qian, Y.F., Jin, A.H., Wang, M., Luo, Y., Qiao, F., Zhang, M.L., Chen, L.Q., Du, Z.Y. Inhibition of mitochondrial citrate shuttle alleviates metabolic syndromes induced by high-fat diet American journal of physiology. Cell physiology 2024 327(3) C737-C749
ZDB-PUB-240821-5 39163131 Lavorato, M., Iadarola, D., Remes, C., Kaur, P., Broxton, C., Mathew, N.D., Xiao, R., Seiler, C., Nakamaru-Ogiso, E., Anderson, V.E., Falk, M.J. dldhcri3 zebrafish exhibited altered mitochondrial ultrastructure, morphology and dysfunction partially rescued by probucol or thiamine JCI insight 2024 9(18)
ZDB-PUB-241104-15 39491675 Lin, J., Li, X., Lu, K., Song, K., Wang, L., Dai, W., Mohamed, M., Zhang, C. Low phosphorus causes hepatic energy metabolism disorder through Dynamin-related protein 1-mediated mitochondrial fission in fish The Journal of nutrition 2024 155(1) 132-152