ZFIN Publication ID	PubMed ID	Authors	Title	Journal	Year	Volume	Pages
ZDB-PUB-000309-34	10693807	Donovan, A., Brownlie, A., Zhou, Y., Shepard, J., Pratt, S.J., Moynihan, J., Paw, B.H., Drejer, A., Barut, B., Zapata, A., Law, T.C., Brugnara, C., Lux, S.E., Pinkus, G.S., Pinkus, J.L., Kingsley, P.D., Palis, J., Fleming, M.D., Andrews, N.C., and Zon, L.I.	Positional cloning of zebrafish ferroportin1 identifies a conserved vertebrate iron exporter	Nature	2000	403(6771)	776-781
ZDB-PUB-001026-12	11005792	Griffiths, W. and Cox, T.	Haemochromatosis: novel gene discovery and the molecular pathophysiology of iron metabolism	Human molecular genetics	2000	9(16)	2377-2382
ZDB-PUB-030305-2	12618376	Lo, J., Lee, S., Xu, M., Liu, F., Ruan, H., Eun, A., He, Y., Ma, W., Wang, W., Wen, Z., and Peng, J.	15,000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis	Genome research	2003	13(3)	455-466
ZDB-PUB-031031-10	14579393	North, T.E. and Zon, L.I.	Modeling human hematopoietic and cardiovascular diseases in zebrafish	Developmental Dynamics : an official publication of the American Association of Anatomists	2003	228(3)	568-583
ZDB-PUB-040217-2	12477932	Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences	Proceedings of the National Academy of Sciences of the United States of America	2002	99(26)	16899-903
ZDB-PUB-040923-1	15378083	Davidson, A.J., and Zon, L.I.	The 'definitive' (and 'primitive') guide to zebrafish hematopoiesis	Oncogene	2004	23(43)	7233-7246
ZDB-PUB-050523-6	15902304	Fraenkel, P.G., Traver, D., Donovan, A., Zahrieh, D., and Zon, L.I.	Ferroportin1 is required for normal iron cycling in zebrafish	J. Clin. Invest.	2005	115(6)	1532-1541
ZDB-PUB-050818-2	16089502	Eckfeldt, C.E., Mendenhall, E.M., Flynn, C.M., Wang, T.F., Pickart, M.A., Grindle, S.M., Ekker, S.C., and Verfaillie, C.M.	Functional analysis of human hematopoietic stem cell gene expression using zebrafish	PLoS Biology	2005	3(8)	e254
ZDB-PUB-060724-13	16844240	Cooper, C.A., Handy, R.D., and Bury, N.R.	The effects of dietary iron concentration on gastrointestinal and branchial assimilation of both iron and cadmium in zebrafish (Danio rerio)	Aquatic toxicology (Amsterdam, Netherlands)	2006	79(2)	167-175
ZDB-PUB-070629-22	17579187	Paffett-Lugassy, N., Hsia, N., Fraenkel, P.G., Paw, B., Leschinsky, I., Barut, B., Bahary, N., Caro, J., Handin, R., and Zon, L.I.	Functional conservation of erythropoietin signaling in zebrafish	Blood	2007	110(7)	2718-2726
ZDB-PUB-070726-29	17640903	Wang, D., Jao, L.E., Zheng, N., Dolan, K., Ivey, J., Zonies, S., Wu, X., Wu, K., Yang, H., Meng, Q., Zhu, Z., Zhang, B., Lin, S., and Burgess, S.M.	Efficient genome-wide mutagenesis of zebrafish genes by retroviral insertions	Proceedings of the National Academy of Sciences of the United States of America	2007	104(30)	12428-12433
ZDB-PUB-081110-7	18987288	Craig, P.M., Galus, M., Wood, C.M., and McClelland, G.B.	Dietary iron alters waterborne-copper induced gene expression in softwater acclimated zebrafish (Danio rerio)	American journal of physiology. Regulatory, integrative and comparative physiology	2009	296(2)	R362-R373
ZDB-PUB-100504-6	20423468	Hong, S.K., Levin, C.S., Brown, J.L., Wan, H., Sherman, B.T., Huang, D.W., Lempicki, R.A., and Feldman, B.	Pre-gastrula expression of zebrafish extraembryonic genes	BMC Developmental Biology	2010	10	42
ZDB-PUB-110207-19	21283739	Gibert, Y., Lattanzi, V.J., Zhen, A.W., Vedder, L., Brunet, F., Faasse, S.A., Babitt, J.L., Lin, H.Y., Hammerschmidt, M., and Fraenkel, P.G.	BMP Signaling Modulates Hepcidin Expression in Zebrafish Embryos Independent of Hemojuvelin	PLoS One	2011	6(1)	e14553
ZDB-PUB-121121-4	23113126	Rafiee, A., Fatemi, S., Jamili, S., Ajdari, S., Riazi-Rad, F., Memarnejadian, A., and Alimohammadian, M.	Cloning, Expression and Characterization of Zebra Fish Ferroportin in Hek 293T Cell Line	Iranian Journal of Public Health	2012	41(1)	79-86
ZDB-PUB-130221-6	23382537	Varshney, G.K., Lu, J., Gildea, D., Huang, H., Pei, W., Yang, Z., Huang, S.C., Schoenfeld, D.S., Pho, N., Casero, D., Hirase, T., Mosbrook-Davis, D.M., Zhang, S., Jao, L.E., Zhang, B., Woods, I.G., Zimmerman, S., Schier, A.F., Wolfsberg, T., Pellegrini, M., Burgess, S.M., and Lin, S.	A large-scale zebrafish gene knockout resource for the genome-wide study of gene function	Genome research	2013	23(4)	727-735
ZDB-PUB-130423-18	23593122	Tao, T., Shi, H., Huang, D., and Peng, J.	Def functions as a cell autonomous factor in organogenesis of digestive organs in zebrafish	PLoS One	2013	8(4)	e58858
ZDB-PUB-130830-8	23922661	Xu, H., Lam, S.H., Shen, Y., and Gong, Z.	Genome-wide identification of molecular pathways and biomarkers in response to arsenic exposure in zebrafish liver	PLoS One	2013	8(7)	e68737
ZDB-PUB-141021-5	25329065	Hamilton, J.L., Hatef, A., Imran Ul-Haq, M., Nair, N., Unniappan, S., Kizhakkedathu, J.N.	Clinically Approved Iron Chelators Influence Zebrafish Mortality, Hatching Morphology and Cardiac Function	PLoS One	2014	9	e109880
ZDB-PUB-150122-9	25603810	Lin, C., Lin, C.N., Wang, Y.C., Liu, F.Y., Chien, Y.W., Chuang, Y.J., Lan, C.Y., Hsieh, W.P., Chen, B.S.	Robustness analysis on interspecies interaction network for iron and glucose competition between Candida albicans and zebrafish during infection	BMC systems biology	2014	8 Suppl 5	S6
ZDB-PUB-151216-16	26657863	Li, X., Rhee, D.K., Malhotra, R., Mayeur, C., Hurst, L.A., Ager, E., Shelton, G., Kramer, Y., McCulloh, D., Keefe, D., Bloch, K.D., Bloch, D.B., Peterson, R.T.	Progesterone receptor membrane component-1 regulates hepcidin biosynthesis	The Journal of Clinical Investigation	2016	126(1)	389-401
ZDB-PUB-160519-28	27184405	Bo, L., Liu, Z., Zhong, Y., Huang, J., Chen, B., Wang, H., Xu, Y.	Iron deficiency anemia's affect on bone formation in zebrafish mutant	Biochemical and Biophysical Research Communications	2016	475(3)	271-6
ZDB-PUB-160529-8	27233600	Jiang, Y., Yan, Y., Wang, X., Zhu, G., Xu, Y.J.	Hepcidin inhibition on the effect of osteogenesis in zebrafish	Biochemical and Biophysical Research Communications	2016	476(1)	1-6
ZDB-PUB-160928-7	27671773	Holowiecki, A., O'Shields, B., Jenny, M.J.	Characterization of heme oxygenase and biliverdin reductase gene expression in zebrafish (Danio rerio): Basal expression and response to pro-oxidant exposures	Toxicology and applied pharmacology	2016	311	74-87
ZDB-PUB-170214-96	26469318	Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R.	RFX transcription factors are essential for hearing in mice	Nature communications	2015	6	8549
ZDB-PUB-170629-10	28655927	Jiang, X.F., Liu, Z.F., Lin, A.F., Xiang, L.X., Shao, J.Z.	Coordination of Bactericidal and Iron Regulatory Functions of Hepcidin in Innate Antimicrobial Immunity in a Zebrafish Model	Scientific Reports	2017	7	4265
ZDB-PUB-180925-9	30248094	Zhang, J., Chambers, I., Yun, S., Phillips, J., Krause, M., Hamza, I.	Hrg1 promotes heme-iron recycling during hemolysis in the zebrafish kidney	PLoS Genetics	2018	14	e1007665
ZDB-PUB-190203-10	30708965	Camiolo, G., Tibullo, D., Giallongo, C., Romano, A., Parrinello, N.L., Musumeci, G., Di Rosa, M., Vicario, N., Brundo, M.V., Amenta, F., Ferrante, M., Copat, C., Avola, R., Li Volti, G., Salvaggio, A., Di Raimondo, F., Palumbo, G.A.	α-Lipoic Acid Reduces Iron-induced Toxicity and Oxidative Stress in a Model of Iron Overload	International Journal of Molecular Sciences	2019	20(3)	
ZDB-PUB-200301-6	32113105	Chandrapalan, T., Kwong, R.W.M.	Influence of dietary iron exposure on trace metal homeostasis and expression of metal transporters during development in zebrafish<sup>&#x2606;</sup>	Environmental pollution (Barking, Essex : 1987)	2020	261	114159
ZDB-PUB-201202-3	33254686	Hassan, A.T., Kwong, R.W.M.	The neurophysiological effects of iron in early life stages of zebrafish	Environmental pollution (Barking, Essex : 1987)	2020	267	115625
ZDB-PUB-220909-1	35985562	Xi, J., Zhang, Z., Wang, Z., Wu, Q., He, Y., Xu, Y., Ding, Z., Zhao, H., Da, H., Zhang, F., Zhao, H., Fang, J.	Hinokitiol functions as a ferroptosis inhibitor to confer neuroprotection	Free radical biology & medicine	2022	190	202-215
ZDB-PUB-220923-16	36137040	Wattrus, S.J., Smith, M.L., Rodrigues, C.P., Hagedorn, E.J., Kim, J.W., Budnik, B., Zon, L.I.	Quality assurance of hematopoietic stem cells by macrophages determines stem cell clonality	Science (New York, N.Y.)	2022	377	1413-1419
ZDB-PUB-221122-1	36403304	Yu, F., Luo, H.R., Cui, X.F., Wu, Y.J., Li, J.L., Feng, W.R., Tang, Y.K., Su, S.Y., Xiao, J., Hou, Z.S., Xu, P.	Changes in aggression and locomotor behaviors in response to zinc is accompanied by brain cell heterogeneity and metabolic and circadian dysregulation of the brain-liver axis	Ecotoxicology and environmental safety	2022	248	114303
ZDB-PUB-230526-29	37227070	Lv, P., Liu, F.	Heme-deficient primitive red blood cells induce HSPC ferroptosis by altering iron homeostasis during zebrafish embryogenesis	Development (Cambridge, England)	2023	150(20)	
ZDB-PUB-231119-4	37977545	Yueyue, F., Qin, W., Jigang, L., Ouyang, L., Hu, Q., Chen, L.	New insights into the antimicrobial mechanism of LEAP2 mutant zebrafish under Aeromonas hydrophila infection using transcriptome analysis	Fish & shellfish immunology	2023	143	109225
ZDB-PUB-240218-10	38366571	Guo, J., Zou, Z., Dou, X., Zhao, X., Wang, Y., Wei, L., Pi, Y., Wang, Y., He, C., Guo, S.	Zebrafish Mbd5 binds to RNA m5C and regulates histone deubiquitylation and gene expression in development metabolism and behavior	Nucleic acids research	2024	52(8)	4257-4275
ZDB-PUB-241127-18	39590793	Zang, X., Wang, Y., Han, C., Cui, L., Liu, H., Tian, S., Liu, K., Li, P., Sun, C., Xia, Q., Zhang, Y.	2-Acetamidophenol (2-AAP) Suppresses the Progression of Atherosclerosis by Alleviating Hyperlipidemia and Attenuating the Ferroptosis Pathway	Marine drugs	2024	22(11)	
ZDB-PUB-241202-1	39615168	Khazaei, M., Ardeshir, R.A.	Protective effects of sulfated polysaccharides from Enteromorpha intestinalis on oxidative stress, liver iron overload and Ferroptosis in Zebra fish exposed to ethanol	Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie	2024	181	117715117715
ZDB-PUB-970210-2	9007226	Haffter, P., Granato, M., Brand, M., Mullins, M.C., Hammerschmidt, M., Kane, D.A., Odenthal, J., van Eeden, F.J., Jiang, Y.J., Heisenberg, C.P., Kelsh, R.N., Furutani-Seiki, M., Vogelsang, E., Beuchle, D., Schach, U., Fabian, C., and Nüsslein-Volhard, C.	The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio	Development (Cambridge, England)	1996	123	1-36
ZDB-PUB-970210-27	9007251	Ransom, D.G., Haffter, P., Odenthal, J., Brownlie, A., Vogelsang, E., Kelsh, R.N., Brand, M., van Eeden, F.J., Furutani-Seiki, M., Granato, M., Hammerschmidt, M., Heisenberg, C.P., Jiang, Y.J., Kane, D.A., Mullins, M.C., and Nüsslein-Volhard, C.	Characterization of zebrafish mutants with defects in embryonic hematopoiesis	Development (Cambridge, England)	1996	123	311-319
ZDB-PUB-991102-12	10515866	Oates, A.C., Brownlie, A., Pratt, S.J., Irvine, D.V., Liao, E.C., Paw, B.H., Dorian, K.J., Johnson, S.L., Postlethwait, J.H., Zon, L.I., and Wilks, A.F.	Gene duplication of zebrafish JAK2 homologs is accompanied by divergent embryonic expresssion patterns: only jak2a is expressed during erythropoiesis	Blood	1999	94(8)	2622-2636