ZFIN is now using GRCz12tu for Genomic Data
Gene
sh3rf2
- ID
- ZDB-GENE-141212-301
- Name
- SH3 domain containing ring finger 2
- Symbol
- sh3rf2 Nomenclature History
- Previous Names
-
- si:dkey-42a21.3
- si:dkey-42a21.4 (1)
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in negative regulation of apoptotic process and positive regulation of JNK cascade. Orthologous to human SH3RF2 (SH3 domain containing ring finger 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR017907 | Zinc finger, RING-type, conserved site |
| Domain | IPR001452 | SH3 domain |
| Domain | IPR001841 | Zinc finger, RING-type |
| Domain | IPR027370 | Zinc finger, RING-type, eukaryotic |
| Family | IPR050384 | Endophilin/SH3RF |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR036028 | SH3-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Endophilin/SH3RF | SH3 domain | SH3-like domain superfamily | Zinc finger, RING/FYVE/PHD-type | Zinc finger, RING-type | Zinc finger, RING-type, conserved site | Zinc finger, RING-type, eukaryotic |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AHV6 | InterPro | 593 | |||||||
| UniProtKB:A0A8M9QGN1 | InterPro | 769 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
sh3rf2-201
(1)
|
Ensembl | 2,815 nt | ||
| mRNA |
sh3rf2-203
(1)
|
Ensembl | 6,264 nt | ||
| ncRNA |
sh3rf2-002
(1)
|
Ensembl | 882 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers