ZFIN is now using GRCz12tu for Genomic Data
Gene
ttc21a
- ID
- ZDB-GENE-141211-62
- Name
- tetratricopeptide repeat domain 21A
- Symbol
- ttc21a Nomenclature History
- Previous Names
-
- si:ch211-198c1.6 (1)
- si:dkeyp-27g9.3
- Type
- protein_coding_gene
- Location
- Chr: 24 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in intraciliary retrograde transport and protein localization to cilium. Predicted to be part of intraciliary transport particle A. Human ortholog(s) of this gene implicated in spermatogenic failure 37. Orthologous to human TTC21A (tetratricopeptide repeat domain 21A).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| spermatogenic failure 37 | Alliance | Spermatogenic failure 37 | 618429 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Tetratricopeptide-like helical domain superfamily | Tetratricopeptide repeat | Tetratricopeptide repeat protein 21A/21B |
|---|---|---|---|---|---|
| UniProtKB:A0A8M9PGN0 | InterPro | 1034 | |||
| UniProtKB:A0A8M6YVN4 | InterPro | 554 | |||
| UniProtKB:A0A8M9PEC8 | InterPro | 1010 | |||
| UniProtKB:A0A8M9P6A7 | InterPro | 1046 | |||
| UniProtKB:A0AB32TKE1 | InterPro | 1013 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ttc21a-201
(1)
|
Ensembl | 3,606 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers