ZFIN is now using GRCz12tu for Genomic Data
Gene
zmp:0000000650
- ID
- ZDB-GENE-130530-653
- Name
- zmp:0000000650
- Symbol
- zmp:0000000650 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 4 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable sialic acid binding activity. Predicted to be involved in cell adhesion. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human SIGLEC16 (sialic acid binding Ig like lectin 16 (gene/pseudogene)).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR003598 | Immunoglobulin subtype 2 |
| Domain | IPR003599 | Immunoglobulin domain subtype |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR013162 | CD80-like, immunoglobulin C2-set |
| Family | IPR003989 | Vascular cell adhesion molecule-1 |
| Family | IPR051036 | Sialic acid-binding Ig-like lectin |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | CD80-like, immunoglobulin C2-set | Immunoglobulin domain subtype | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin subtype 2 | Sialic acid-binding Ig-like lectin | Vascular cell adhesion molecule-1 |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:F1QB39 | InterPro | 363 | ||||||||
| UniProtKB:A0A8M6YX94 | InterPro | 577 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
zmp:0000000650-201
(1)
|
Ensembl | 2,012 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance