ZFIN is now using GRCz12tu for Genomic Data
Gene
ptgdsa
- ID
- ZDB-GENE-081022-118
- Name
- prostaglandin D2 synthase a
- Symbol
- ptgdsa Nomenclature History
- Previous Names
-
- im:7160217
- zgc:194505
- zgc:194526
- Type
- protein_coding_gene
- Location
- Chr: 10 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable small molecule binding activity. Predicted to be located in extracellular region. Is expressed in yolk syncytial layer. Human ortholog(s) of this gene implicated in carotid artery disease. Orthologous to human PTGDS (prostaglandin D2 synthase).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 6 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7160217 (4 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Calycin | Lipocalin | Lipocalin/cytosolic fatty-acid binding domain | Lipocalin family conserved site |
|---|---|---|---|---|---|---|
| UniProtKB:B3DI79 | InterPro | 190 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ptgdsa-201
(1)
|
Ensembl | 936 nt | ||
| mRNA |
ptgdsa-202
(1)
|
Ensembl | 734 nt |
Interactions and Pathways
No data available
Plasmids
No data available