Gene
hspa12b
- ID
- ZDB-GENE-070226-1
- Name
- heat shock protein 12B
- Symbol
- hspa12b Nomenclature History
- Previous Names
-
- GA2692 (1)
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Description
- Acts upstream of or within sprouting angiogenesis. Is expressed in several structures, including brain; cardiovascular system; cranium; somite 1; and ventral mesoderm. Orthologous to human HSPA12B (heat shock protein family A (Hsp70) member 12B).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Hu et al., 2006
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 4 figures from Hu et al., 2006
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000477 | Reverse transcriptase domain |
| Domain | IPR001584 | Integrase, catalytic core |
| Domain | IPR041577 | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain |
| Domain | IPR041588 | Integrase zinc-binding domain |
| Family | IPR050951 | Retrovirus-related Pol polyprotein |
| Homologous_superfamily | IPR012337 | Ribonuclease H-like superfamily |
| Homologous_superfamily | IPR036397 | Ribonuclease H superfamily |
| Homologous_superfamily | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| Homologous_superfamily | IPR043129 | ATPase, nucleotide binding domain |
| Homologous_superfamily | IPR043502 | DNA/RNA polymerase superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | ATPase, nucleotide binding domain | DNA/RNA polymerase superfamily | Integrase, catalytic core | Integrase zinc-binding domain | Retrovirus-related Pol polyprotein | Reverse transcriptase/Diguanylate cyclase domain | Reverse transcriptase domain | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain | Ribonuclease H-like superfamily | Ribonuclease H superfamily |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q0R4G9 | InterPro | 691 | ||||||||||
| UniProtKB:A0AB32TX09 | InterPro | 1399 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
hspa12b-201
(1)
|
Ensembl | 2,870 nt | ||
| ncRNA |
hspa12b-002
(1)
|
Ensembl | 774 nt |
Interactions and Pathways
No data available
Plasmids
No data available